Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12- 23] 123 sequences; 24,532,870 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq31 91.5 1e-13 seq36 87.8 2e-12 seq21 82.4 8e-11 >seq31 Length=897251 Score = 91.5 bits (100), Expect = 1e-13 Identities = 155/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || ||||| | || | || ||||| | || ||||| ||||| ||||| || || Sbjct 114235 CCACCTCGGAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCG 114176 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| || |||||||| || || || |||| ||||||||||| || || || Sbjct 114175 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGG 114116 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 |||||||| ||||| ||| || || | | || | ||||||| | ||| ||| Sbjct 114115 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 114056 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGC 139762 || | ||| | ||||||||| || | || || ||||| |||||| Sbjct 114055 TCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACGAAGATTTGC 114011 >seq36 Length=1210608 Score = 87.8 bits (96), Expect = 2e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 52921 TACATCGAGTTTGTTGCGGACAGACTGTTGATGCAGCTCGGTCAGCCGAAATACTATAAT 52980 ||||||||||||||||| ||| || ||||| | | || | || || || ||| Sbjct 55431 TACATCGAGTTTGTTGCCGACCGATTGTTGGTCGCTTTGGGCAACCCCAAGGTCTGGAAT 55372 Query 52981 GCGCGTAACCCCTTTTCGTTTATGAACAACATATCGCTCGAGGGCAAAACAAACTTTTTC 53040 || ||||||||| || ||||||| || ||||||||||||||||||||||| ||| Sbjct 55371 GCTGAGAACCCCTTTGACTTCATGAACATGATCTCGCTCGAGGGCAAAACAAACTTCTTC 55312 Query 53041 GAGAGACGTGT 53051 |||| ||||| Sbjct 55311 GAGAAGCGTGT 55301 >seq21 Length=1587489 Score = 82.4 bits (90), Expect = 8e-11 Identities = 143/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 || ||||| | || ||||| ||||| ||||| || || | || | || ||| Sbjct 1354157 ACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGAGTACGGCCATCCTCG 1354216 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675 ||||| || || || |||| ||||||||||| || || || || ||||| ||||| | Sbjct 1354217 AGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGGGGAATTCCTTCCTTGTCTTGG 1354276 Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735 || || || | | || | ||||||| || ||| ||||| | ||| | |||||| Sbjct 1354277 ATCTTGGCCTTGACGTTGTCGATCGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTG 1354336 Query 139736 CCGGTCAACGTTTTTACGAATATTTGCA 139763 || || | || || ||||| ||||||| Sbjct 1354337 CCCGTAAGGGTCTTGACGAAGATTTGCA 1354364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063237301600