Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12-
23] 123 sequences; 24,532,870 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq36 100 4e-16
>seq36
Length=1210608
Score = 100 bits (110), Expect = 4e-16
Identities = 171/242 (71%), Gaps = 6/242 (2%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| |||| | |||||| ||||| |||| ||||| ||||| | ||||||| | || ||
Sbjct 56497 ATCTGGGCACAGTACAAGAAGGCCGAGGCATCCTTCTGGACCGCCGAAGAGATGGACTTG 56438
Query 125079 TCCAAGGACCTGTACGATTGGGA-GACTCGTTTGACTGAAACTGAGCGAGAGTTTATATC 125137
||||||||| || |||| ||||| || | | | || ||||| | || || ||
Sbjct 56437 TCCAAGGACATGCACGACTGGGACAACAAGCTCAAGCCCGAC-GAGCGCTACTTCATCTC 56379
Query 125138 GCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACG 125197
|||| | | |||||||| |||| ||||| || ||||||||||| || || | ||
Sbjct 56378 GCACGTCCTCGCCTTCTTCGCCGCGTCCGACGGCATCGTCAACGAGAACTTGGTCGAGCG 56319
Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTG-TCG-TGCTTTTACGGATTCCAAATCATG 125255
||||| ||| | ||| ||| | | ||| ||||| ||||| ||||||||||||
Sbjct 56318 GTTCTCCGGTGAG--GTCCAGTCCGCCGAAGCTCGATGCTTCTACGGTTTCCAAATCATG 56261
Query 125256 AT 125257
||
Sbjct 56260 AT 56259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741058060621480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |