Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12- 23] 123 sequences; 24,532,870 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq79 113 4e-20 >seq79 Length=1842920 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 |||||||||||| || || ||||| || | ||| || ||| | || | |||||| Sbjct 452124 CACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTC 452065 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||| || || | ||||| |||| ||||| ||||| || || || || ||||| | Sbjct 452064 GAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTG 452005 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 ||| || ||||||||| | ||| ||||| | ||||| || | |||||| ||||| Sbjct 452004 AATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTTT 451945 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || |||||||| ||||| Sbjct 451944 ACCGGTCAGGGTCTTGACAAAGATTTGCAT 451915 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 |||||||||||| || || ||||| || | ||| || ||| | || | |||||| Sbjct 452807 CACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTC 452748 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||| || || | ||||| |||| ||||| ||||| || || || || ||||| | Sbjct 452747 GAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTG 452688 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 ||| || ||||||||| | ||| ||||| | ||||| || | |||||| ||||| Sbjct 452687 AATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTTT 452628 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || |||||||| ||||| Sbjct 452627 ACCGGTCAGGGTCTTGACAAAGATTTGCAT 452598 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 |||||||||||| || || ||||| || | ||| || ||| | ||| | |||||| Sbjct 678872 CACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTC 678813 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||| || || | ||||| |||| ||||| |||||||| || || || ||||| | Sbjct 678812 GAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTG 678753 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || ||||||||| | ||| ||||| | ||||| || | |||||| || || Sbjct 678752 GATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTCTT 678693 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || || || || ||||| ||||| Sbjct 678692 GCCAGTCAGGGTCTTGACGAAGATTTGCAT 678663 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 |||||||||||| || || ||||| || | ||| || ||| | || | |||||| Sbjct 679100 CACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTC 679041 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||| || || | ||||| |||| ||||| ||||||||||| || || ||||| | Sbjct 679040 GAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTG 678981 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || ||||||||| | ||| ||||| | ||||| || | |||||| ||||| Sbjct 678980 GATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTTT 678921 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || ||||| ||||| Sbjct 678920 GCCGGTCAGGGTCTTGACGAAGATTTGCAT 678891 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 |||||||||||| || || ||||| || | || || ||| | || | |||||| Sbjct 679328 CACCAAGTGCAACGTCGACTCCTTCTGGATATTGTAGTCGGCGAGCGTACGGCCATCCTC 679269 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||| || || | ||||| |||| ||||| |||||||| || || || ||||| | Sbjct 679268 GAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTG 679209 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 ||| || ||||||||| | ||| ||||| | ||||| || | |||||| ||||| Sbjct 679208 AATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTTT 679149 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || |||||||| ||||| Sbjct 679148 GCCGGTCAGGGTCTTGACAAAGATTTGCAT 679119 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 |||||||||||| || || ||||| || | ||| || ||| | || | |||||| Sbjct 451896 CACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTC 451837 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||| || || | ||||| |||| ||||| ||||| || || || || ||||| | Sbjct 451836 GAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTG 451777 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || ||||| ||| | ||| ||||| | || || || | |||||| ||||| Sbjct 451776 GATCTTGGCCTTCACGTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTTTT 451717 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || ||||| ||||| Sbjct 451716 GCCGGTCAGGGTCTTGACGAAGATTTGCAT 451687 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 |||||||||||| || || ||||| || | ||| || ||| | || | |||||| Sbjct 452352 CACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTC 452293 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||| || || | ||||| |||| ||||| ||||| || || || || ||||| | Sbjct 452292 GAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTG 452233 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || ||||| ||| | ||| ||||| | || || || | |||||| ||||| Sbjct 452232 GATCTTGGCCTTCACGTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTTTT 452173 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || ||||| ||||| Sbjct 452172 GCCGGTCAGGGTCTTGACGAAGATTTGCAT 452143 Score = 91.5 bits (100), Expect = 1e-13 Identities = 147/210 (70%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 |||||||||||| || || ||||| || | ||| || ||| | || | |||||| Sbjct 452579 CACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTC 452520 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||| || || | ||||| |||| ||||| ||||| || || || || ||||| | Sbjct 452519 GAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGG-GGGATGCCCTCCTTGTCCTG 452461 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || ||||| ||| | ||| ||||| | || || || | |||||| ||||| Sbjct 452460 GATCTTGGCCTTCACGTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTTTT 452401 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || ||||| ||||| Sbjct 452400 GCCGGTCAGGGTCTTGACGAAGATTTGCAT 452371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448290510752280