Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12- 23] 123 sequences; 24,532,870 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq21 168 1e-37 seq34 158 2e-34 >seq21 Length=1587489 Score = 168 bits (186), Expect = 1e-37 Identities = 179/236 (76%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || |||||||| || ||||||||||| || ||||| ||||| || ||||||||||| Sbjct 1349506 CGCGACAACATCCAGGGTATCACCAAGCCCGCCATCCGCCGTCTCGCACGTCGTGGTGGT 1349565 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| |||| || || |||| || |||| || | ||| | |||||||||||| Sbjct 1349566 GTCAAGCGTATCTCCGGCCTGATCTACGAGGAGACCCGAGGTGTGCTCAAGATCTTCCTC 1349625 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| |||||||| ||| | || ||| ||||||||||| || || ||||| |||||| Sbjct 1349626 GAGAACGTTATCCGTGACTCGGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACC 1349685 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 || | ||| ||||||| || | || || ||||| | | | || ||||| || Sbjct 1349686 TCGCTCGATGTCGTCTACGCCCTCAAGCGATCCGGCCGAACGCTCTACGGTTTCGG 1349741 Score = 168 bits (186), Expect = 1e-37 Identities = 179/236 (76%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || |||||||| || ||||||||||| || ||||| ||||| || ||||||||||| Sbjct 1427588 CGCGACAACATCCAGGGTATCACCAAGCCCGCCATCCGCCGTCTCGCACGTCGTGGTGGT 1427529 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| |||| || || |||| || |||| || | ||| | |||||||||||| Sbjct 1427528 GTCAAGCGTATCTCCGGCCTGATCTACGAGGAGACCCGAGGTGTGCTCAAGATCTTCCTC 1427469 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| |||||||| ||| | || ||| ||||||||||| || || ||||| |||||| Sbjct 1427468 GAGAACGTTATCCGTGACTCGGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACC 1427409 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 || | ||| ||||||| || | || || ||||| | | | || ||||| || Sbjct 1427408 TCGCTCGATGTCGTCTACGCCCTCAAGCGATCCGGCCGAACGCTCTACGGTTTCGG 1427353 Score = 165 bits (182), Expect = 1e-36 Identities = 178/236 (75%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || |||||||| || ||||||||||| || ||||| ||||| || ||||||||||| Sbjct 888959 CGCGACAACATCCAGGGTATCACCAAGCCCGCCATCCGCCGTCTCGCACGTCGTGGTGGT 888900 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| |||| || || |||| || |||| || | ||| | |||||||||||| Sbjct 888899 GTCAAGCGTATCTCCGGCCTGATCTACGAGGAGACCCGAGGTGTGCTCAAGATCTTCCTC 888840 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| |||||||| ||| | || ||| ||||||||||| || || ||||| |||||| Sbjct 888839 GAGAACGTTATCCGTGACTCGGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACC 888780 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 || | || ||||||| || | || || ||||| | | | || ||||| || Sbjct 888779 TCGCTCGACGTCGTCTACGCCCTCAAGCGATCCGGCCGAACGCTCTACGGTTTCGG 888724 >seq34 Length=2298476 Score = 158 bits (174), Expect = 2e-34 Identities = 155/200 (78%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || |||||||| || ||||||||||| || ||||| ||||| || ||||||||||| Sbjct 475297 CGCGACAACATCCAGGGTATCACCAAGCCCGCCATCCGCCGTCTCGCACGTCGTGGTGGT 475238 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| |||| || || |||| ||||||| || | ||| | |||||||||||| Sbjct 475237 GTCAAGCGTATCTCCGGCCTGATCTACGAAGAGACGCGAGGTGTCCTTAAGATCTTCCTC 475178 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| |||| ||| | || ||| ||||| ||||| || || ||||| |||||| Sbjct 475177 GAGAACGTGATCCGTGACTCGGTCACCTACACCGAACACGCCAAGCGCAAGACCGTCACC 475118 Query 16637 TCCATGGATATCGTCTATGC 16656 || | || ||||||| || Sbjct 475117 TCGCTCGACGTCGTCTACGC 475098 Score = 158 bits (174), Expect = 2e-34 Identities = 155/200 (78%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || |||||||| || ||||||||||| || ||||| ||||| || ||||||||||| Sbjct 518326 CGCGACAACATCCAGGGTATCACCAAGCCCGCCATCCGCCGTCTCGCACGTCGTGGTGGT 518385 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| |||| || || |||| ||||||| || | ||| | |||||||||||| Sbjct 518386 GTCAAGCGTATCTCCGGCCTGATCTACGAAGAGACGCGAGGTGTCCTTAAGATCTTCCTC 518445 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| |||| ||| | || ||| ||||| ||||| || || ||||| |||||| Sbjct 518446 GAGAACGTGATCCGTGACTCGGTCACCTACACCGAACACGCCAAGCGCAAGACCGTCACC 518505 Query 16637 TCCATGGATATCGTCTATGC 16656 || | || ||||||| || Sbjct 518506 TCGCTCGACGTCGTCTACGC 518525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075087540239