Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12- 23] 123 sequences; 24,532,870 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq55 111 3e-19 >seq55 Length=958678 Score = 111 bits (122), Expect = 3e-19 Identities = 268/401 (67%), Gaps = 6/401 (1%) Strand=Plus/Minus Query 193770 GAGAAAG-ATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGT--GGTGTTCTA 193826 || |||| | || ||| |||| || || || ||| ||| ||||| || ||| || | Sbjct 914262 GACAAAGCACGTCCGCTTCTACCAAGCCTCGACCTCCGAGCTGTACGGCAAGGTCGTCGA 914203 Query 193827 GGCACTCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGTGTAGCAAAG 193886 | || || | ||| ||||| || || || | || || || ||||| || || || ||| Sbjct 914202 G--ACCCCTCAATCCGAAACGACGCCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAG 914145 Query 193887 TTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTCCACGCTAGTTCT 193946 ||||| | | |||||| ||||||| || || |||||||| | | |||| | | Sbjct 914144 TTGTACGCCTTCTGGATCGTCAAGAACTACCGCGAGTCATACGACATGTACGCGTGCAAT 914085 Query 193947 GGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGATT 194006 ||||| |||||||| ||||| || ||| | | ||| || || || || | |||||| Sbjct 914084 GGTATCCTCTTCAACCACGAGTCCCCACGTCGTGGTCGCACCTTCGTCACGAGGAAGATT 914025 Query 194007 ACACAAGGTTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTTTATCTTGGTAATCTT 194066 | | || | | | ||||||| | || |||| | || || || || || | Sbjct 914024 TCGCGAGCTGTCGCCGAGATCTCACTCGGTCAACAGGACTGCCTCTACCTCGGCAACATG 913965 Query 194067 AATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGGTTAATGTTG 194126 | || ||| | ||||||||||| || || ||||| || | |||||| | ||| | Sbjct 913964 GAGGCCAAGCGTGATTGGGGACATGCGCGCGACTATGTCGAGGGCATGTGGATGATGCTT 913905 Query 194127 CAACAGGATGAACCCGATGATTATGTGATTGCTACAGGTGA 194167 || ||||| | ||||| || | ||| | || || ||||| Sbjct 913904 CAGCAGGA-CACCCCGACGACTTTGTTCTCGCGACGGGTGA 913865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807553958383880