Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12- 23] 123 sequences; 24,532,870 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq36 224 3e-53 >seq36 Length=1210608 Score = 224 bits (248), Expect = 3e-53 Identities = 513/767 (67%), Gaps = 4/767 (1%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| |||||| |||| || | | |||||| || || | | | || ||| | || || Sbjct 4827 TTCACCCACGCCTCGCCGACGCTCTTCAATGCCGGTACCCCTCACCCGCAGCTCTCGTCG 4886 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| | | | ||||||||||| || || || || |||| ||||| || |||| Sbjct 4887 TGCTTCTTGGTCACGATGAAGGACGACTCGATTGAAGGCATCTACGACACGCTCAAGACG 4946 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC- 363725 || || || || ||||||| || || || || ||| || |||||||| | || || Sbjct 4947 TGCGCGCTCATCTCCAAGACCGCCGGTGGTATCGGTTTAAGCATCCACAACATCCGCGCG 5006 Query 363726 ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCG 363785 || | | ||||| |||||| || ||||||||||| | || |||||||| || Sbjct 5007 ACCGG-CTCCTACATCGCCGGCACGAACGGCTACTCGAATGGCATCGTCCCCATGCTGCG 5065 Query 363786 TGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTT 363845 || | |||| || ||| | ||||||||||| ||||| ||||| || || || Sbjct 5066 CGTCTACAACAACACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTT 5125 Query 363846 TGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA-AA 363904 || || || |||||||| || ||||| | || ||||| || || || || || || Sbjct 5126 CGCGATCTACCTCGAGCCGTGGCACGCCGACGTCTTCGAGTTCCTGGACCTTCGCAAGAA 5185 Query 363905 ACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACC 363964 ||| || || || ||| | || || |||||||| |||| ||| || ||| | | || | Sbjct 5186 TCAC-GGCAAGGAAGAAGTCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATCCCCGATC 5244 Query 363965 ATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTC 364024 || ||| |||| || ||||| | | ||| | ||||| ||||| ||| | Sbjct 5245 TGTTCATGGAGCGTGTCGAGGCCGCCGGCGAGTGGCCCCTCTTCTGCCCCGCCGAGGCCC 5304 Query 364025 CAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGG 364084 | || || ||| || | || || || | | || | ||| ||||| ||| || Sbjct 5305 CCGGCCTCCACGAAGTCTACGGCGAAGAGTTCCGCGTCCTGTTCGAGAAGTACGAAAAGG 5364 Query 364085 AGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGC 364144 |||| || ||||| || ||||| || ||||| |||| || ||| | || | | Sbjct 5365 AGGGTCGCGCCAAGAAGACCATCCCCGCGCAAAAGCTTTGGTACGCGATCCTCGAGGCCC 5424 Query 364145 AGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACC 364204 || | ||||| || | |||| ||| | ||||| || | ||| ||||| |||| Sbjct 5425 AGGTCGAGACCGGCAACCCCTTCATGCTCTACAAGGACGCCGCGAACAAAAAGTCGAACC 5484 Query 364205 AGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCG 364264 | || |||| || || || | | ||||| || |||||||| || || ||| | | Sbjct 5485 AAAAGAACCTCGGCACGATCAAATCGTCGAACCTGTGCACCGAGATCATCGAGTACTCGG 5544 Query 364265 CTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCG 364311 ||||||||||| || || || ||| | || ||||||||| | ||| Sbjct 5545 CTCCCGACGAGTGCGCTGTCTGCAACTTGGCTTCGATCGCGTTGCCG 5591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303351545996186