Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12- 23] 123 sequences; 24,532,870 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq79 96.9 3e-15 >seq79 Length=1842920 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| || | | || || || | ||| || || || || || ||||| ||| Sbjct 679346 ACCACCACGGAGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATATTGTAGTCGGC 679287 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | ||||| ||| || || || || |||||| |||| | ||||| ||||| ||||| Sbjct 679286 GAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGG 679227 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||||| || ||||| |||||| || | | || | ||||| | || ||||| Sbjct 679226 GATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCGAC 679167 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | ||||||||||||||| || || ||||| || ||||| Sbjct 679166 CTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGACAAAGATTTGCAT 679119 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | | || || || | ||| || || || || |||||||| ||| Sbjct 679120 ATACCACCGCGGAGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCG 679061 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||| ||| || || || || |||||| |||| | ||||| ||||| ||| Sbjct 679060 GCGAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGA 679001 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| ||||| || | | || | ||||| | || ||| Sbjct 679000 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCG 678941 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||||||||||||||| || || || || || ||||| Sbjct 678940 ACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 678891 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | | || || || | ||| || || || || |||||||| ||| Sbjct 451916 ATACCACCGCGGAGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCG 451857 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||| ||| || || || || |||||| |||| | ||||| ||||| || Sbjct 451856 GCGAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGG 451797 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || ||||| ||||| || | | || | ||||| | || || Sbjct 451796 GGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCCGACGACTCA 451737 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||||||||||||||| || || || || || ||||| Sbjct 451736 ACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 451687 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | | || || || | ||| || || || || |||||||| ||| Sbjct 452372 ATACCACCGCGGAGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCG 452313 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||| ||| || || || || |||||| |||| | ||||| ||||| || Sbjct 452312 GCGAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGG 452253 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || ||||| ||||| || | | || | ||||| | || || Sbjct 452252 GGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCCGACGACTCA 452193 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||||||||||||||| || || || || || ||||| Sbjct 452192 ACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 452143 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/227 (68%), Gaps = 1/227 (0%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 |||||||| || | | || || || | ||| || || || || ||||| || ||| Sbjct 453051 CCGCCACGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTATAGTCGGCG 452992 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | ||||| ||| || || || || |||||| |||| | ||||| ||||| || ||| Sbjct 452991 AGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGA 452932 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 |||| || ||||| |||||| || | | || | ||||| | || || || Sbjct 452931 -TGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCAACC 452873 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | ||||||||||||||| || || || || || ||||| Sbjct 452872 TCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 452826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420133770192276