Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12- 23] 123 sequences; 24,532,870 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq44 93.3 4e-14 >seq44 Length=493270 Score = 93.3 bits (102), Expect = 4e-14 Identities = 168/243 (69%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 20411 GCCGGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCC 20470 || |||||||| |||| || |||||| || || ||| || || | || || | Sbjct 153384 GCGGGGTTCCAAGCACTCAAAATGATCCTCCTGTCGGTGGGGTTCTCCTTGATGCTCTTG 153443 Query 20471 ACAATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGC-GTCCACGTA 20529 |||| | | ||| || || | ||||| ||| ||| ||| | | || |||| || Sbjct 153444 ACAACCTGCATCAACTGATCGACCCCCTCGCCCTGATAATCATCCTTGGCCGTCCTA-TA 153502 Query 20530 CGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCT 20589 | | |||||||| ||||||||||| || || ||||| || |||||||||||||| || Sbjct 153503 CTCTGCCCCAAAATGCCTCCACTGAAACCCATAAACCGGCCCCAAATCCCCCTCTTCCCT 153562 Query 20590 GTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGAC 20649 ||| ||| || | ||| ||||||| | |||||||| ||||| |||||||| Sbjct 153563 ATGCCCCAACCCAACCTTCTCCAAGAACTCCTTCGAGCCATTCCCATCCCAAATCTTGAC 153622 Query 20650 TCC 20652 || Sbjct 153623 CCC 153625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441372121389320