Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12- 23] 123 sequences; 24,532,870 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq79 145 2e-29 seq31 127 5e-24 seq21 114 3e-20 >seq79 Length=1842920 Score = 145 bits (160), Expect = 2e-29 Identities = 169/227 (74%), Gaps = 1/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || | || | ||| || || ||||| || ||||||||| Sbjct 452596 CCACCGCGGAGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCG 452537 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 ||||| || || || || | || || || |||||||||| ||||| || | | ||| Sbjct 452536 AGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTG-GTCTGGGGG 452478 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || || |||||||| || || | || ||| || || Sbjct 452477 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCCGACGACTCAACC 452418 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||||||||| || |||||||| ||||||||||| || ||||| Sbjct 452417 TCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 452371 Score = 141 bits (156), Expect = 2e-28 Identities = 170/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || | || | ||| || || ||||| || ||||||||| Sbjct 451913 CCACCGCGGAGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCG 451854 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 ||||| || || || || | || || || |||||||||| ||||| || |||||| Sbjct 451853 AGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGG---TCTGGG 451797 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || |||||||| || || |||||||| || || | || ||| || Sbjct 451796 GGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCCGACGACTCA 451737 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||||||||| || |||||||| ||||||||||| || ||||| Sbjct 451736 ACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 451687 Score = 141 bits (156), Expect = 2e-28 Identities = 170/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || | || | ||| || || ||||| || ||||||||| Sbjct 452369 CCACCGCGGAGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCG 452310 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 ||||| || || || || | || || || |||||||||| ||||| || |||||| Sbjct 452309 AGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGG---TCTGGG 452253 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || |||||||| || || |||||||| || || | || ||| || Sbjct 452252 GGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCCGACGACTCA 452193 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||||||||| || |||||||| ||||||||||| || ||||| Sbjct 452192 ACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 452143 Score = 141 bits (156), Expect = 2e-28 Identities = 170/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || | || | ||| || || ||||| || ||||||||| Sbjct 678889 CCACCGCGGAGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCG 678830 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG- 288365 |||||||| || || || | || || || |||||||||| ||||| || ||||| Sbjct 678829 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGG---TCTGGA 678773 Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||| || || || |||||||| || || || ||||| || || | || ||| || Sbjct 678772 GGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCG 678713 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||||||||||||||| || ||||| ||||||||||| || ||||| Sbjct 678712 ACCTCGAGCGTGATCGTCTTGCCAGTCAGGGTCTTGACGAAGATTTGCAT 678663 Score = 136 bits (150), Expect = 9e-27 Identities = 169/230 (73%), Gaps = 1/230 (0%) Strand=Plus/Minus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 ||||| || ||||| | || || | || | ||| || || ||||| ||||||||| Sbjct 453054 TGTCCGCCACGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTATAGTCG 452995 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 |||||||| || || || || | || || || |||||||||| ||||| || | | Sbjct 452994 GCGAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTG-GTCTGG 452936 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| || || || ||||| || || || || ||||| || || | || ||| || Sbjct 452935 GGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCA 452876 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||||||||| || |||||||| ||||||||||| || ||||| Sbjct 452875 ACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 452826 Score = 132 bits (146), Expect = 1e-25 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || | || | ||| || || ||||| || ||||||||| Sbjct 679117 CCACCGCGGAGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCG 679058 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 ||||| || || || || | || || || |||||||||| ||||| || ||||| Sbjct 679057 AGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGG---TCTGGA 679001 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || |||||||| || || || ||||| || || | || ||| || Sbjct 679000 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCG 678941 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||||||||| || |||||||| ||||||||||| || ||||| Sbjct 678940 ACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 678891 Score = 131 bits (144), Expect = 4e-25 Identities = 176/243 (72%), Gaps = 9/243 (4%) Strand=Plus/Minus Query 288234 GATTCATACATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGAT 288293 ||||||| || ||||| ||||| | || || | || | ||| || || ||||| Sbjct 679355 GATTCAT---TGACCACCACGGAGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGAT 679299 Query 288294 ATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTG 288353 ||| |||||||||||||| || || || || | || || || |||||||||| ||||| Sbjct 679298 ATTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTG 679239 Query 288354 TTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGA 288410 || ||||| ||| || || || ||||| || || || || ||||| || || | Sbjct 679238 CTGG---TCTGGAGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGT 679182 Query 288411 ATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTG 288470 || ||| || || |||||||||||||| || |||||||| |||||||| || || || Sbjct 679181 GTCCGACGACTCGACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGACAAAGATTTG 679122 Query 288471 CAT 288473 ||| Sbjct 679121 CAT 679119 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || | || | ||| || || ||||| || ||||||||| Sbjct 452141 CCACCGCGGAGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCG 452082 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 ||||| || || || || | || || || |||||||||| ||||| || |||||| Sbjct 452081 AGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGG---TCTGGG 452025 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || ||||| || || || || ||||| || || | || ||| || Sbjct 452024 GGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCG 451965 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||||||||| || |||||||| |||||||| || || ||||| Sbjct 451964 ACCTCGAGCGTGATCGTTTTACCGGTCAGGGTCTTGACAAAGATTTGCAT 451915 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || | || | ||| || || ||||| || ||||||||| Sbjct 452824 CCACCGCGGAGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCG 452765 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 ||||| || || || || | || || || |||||||||| ||||| || |||||| Sbjct 452764 AGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGG---TCTGGG 452708 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || ||||| || || || || ||||| || || | || ||| || Sbjct 452707 GGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCG 452648 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||||||||| || |||||||| |||||||| || || ||||| Sbjct 452647 ACCTCGAGCGTGATCGTTTTACCGGTCAGGGTCTTGACAAAGATTTGCAT 452598 >seq31 Length=897251 Score = 127 bits (140), Expect = 5e-24 Identities = 144/192 (75%), Gaps = 6/192 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || |||||||| || ||||| ||||| ||||| || || || | || || || |||||| Sbjct 114199 TCCTTTTGGATGTTGTAGTCCGCGAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAG 114140 Query 288343 ATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || ||||| || || ||||| ||| ||||| || || ||||| || || || ||| Sbjct 114139 ATGAGACGTTGCTGG---TCTGGCGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACG 114083 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||| ||| || || ||||| ||||||||||| || || ||||||||| Sbjct 114082 TTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTG 114023 Query 288460 ACGAATATCTGC 288471 ||||| || ||| Sbjct 114022 ACGAAGATTTGC 114011 >seq21 Length=1587489 Score = 114 bits (126), Expect = 3e-20 Identities = 142/193 (74%), Gaps = 6/193 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || |||||||| || ||||| ||||| || || || || || | || || || |||||| Sbjct 1354175 TCCTTTTGGATGTTGTAGTCCGCGAGAGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAG 1354234 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || ||||| || || |||||| |||||||| || || ||||| || || || ||| Sbjct 1354235 ATGAGACGTTGCTGG---TCTGGGGGAATTCCTTCCTTGTCTTGGATCTTGGCCTTGACG 1354291 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||| || || || ||||| ||||| ||||| || || || |||||| Sbjct 1354292 TTGTCGATCGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTAAGGGTCTTG 1354351 Query 288460 ACGAATATCTGCA 288472 ||||| || |||| Sbjct 1354352 ACGAAGATTTGCA 1354364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179652540938394