Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12- 23] 123 sequences; 24,532,870 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq36 251 7e-62 >seq36 Length=1210608 Score = 251 bits (278), Expect = 7e-62 Identities = 734/1124 (65%), Gaps = 25/1124 (2%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | || |||| |||||| || || ||| || ||| | || || || |||| | Sbjct 4662 TACAACTATTTTGGCTTCAAGACACTCGAGCGCTCCTACTTGCTTCGCATCGACGGCAAG 4721 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || |||| || ||||| || |||| ||||| |||||| |||| || ||||| |||||| Sbjct 4722 GTCGCCGAACGTCCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGAC 4781 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTAT---ACCATGGCC 93894 || | || |||| | | | || |||| || | | || ||| ||| Sbjct 4782 ATCGAGCGCGTCTTGCAGTCCTACAACCTCATGTCCGA---GCGCTACTTCACCCACGCC 4838 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATG 93954 | ||||| || ||||| || || ||||| || ||| | || ||||| ||| || | Sbjct 4839 TCGCCGACGCTCTTCAATGCCGGTACCCCTCACCCGCAGCTCTCGTCGTGCTTCTTGGTC 4898 Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014 |||| |||| |||||| || || || | ||||| |||||| || ||| |||| Sbjct 4899 ACGATGAAGGACGACTCGATTGAAGGCATCTACGACACGCTCAAGACGTGCGCGCTCATC 4958 Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074 || || ||| || || ||||| | || ||||| || | || || | || |||||| Sbjct 4959 TCCAAGACCGCCGGTGGTATCGGTTTAAGCATCCACAACATCCGCGCGACCGGCTCCTAC 5018 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 ||| ||| || || ||| ||| || ||| ||||||| ||||| || |||| ||||||| Sbjct 5019 ATCGCCGGCACGAACGGCTACTCGAATGGCATCGTCCCCATGCTGCGCGTCTACAACAAC 5078 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | ||||||||||| ||||| ||||| | | | || | |||||| |||| ||| Sbjct 5079 ACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTC 5138 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 ||||| |||||||| ||||| | ||| | ||||| || ||||| |||||||| || Sbjct 5139 GAGCCGTGGCACGCCGACGTCTTCGAGTTCCTGGACCTTCGCAAGAATCACGGCAAGGAA 5198 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 | | || | || ||||||| || |||||| | || || || || ||| | || Sbjct 5199 GAAGTCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATCCCCGATCTGTTCATGGAGCGT 5258 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 |||||| | || ||| || || || ||| || ||||| || ||| Sbjct 5259 GTCGAGGCCGCCGGCGAGTGGCCCCTCTTCTGCCCCGCCGAGGCCCCCGGCCTCCACGAA 5318 Query 94375 GTTTGTGG-ATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAG 94433 || | || | ||| | | | ||| | |||||| | |||| |||| Sbjct 5319 GTCTACGGCGAAGAGTTCCG-CGTCCTGTTCGAGAAGTACGAAAAGGAGGGTCGCGCCAA 5377 Query 94434 GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGG 94493 |||| || || ||||| ||| | |||| | || | ||||| ||||| || Sbjct 5378 GAAGACCATCCCCGCGCAAAAGCTTTGGTACGCGATCCTCGAGGCCCAGGTCGAGACCGG 5437 Query 94494 TACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGG 94553 | |||| ||| | | ||||||| | | ||| ||||| ||||| || ||||||| Sbjct 5438 CAACCCCTTCATGCTCTACAAGGACGCCGCGAACAAAAAGTCGAACCAAAAGAACCTCGG 5497 Query 94554 GGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGAT 94613 |||||| ||||| |||||||||||||| ||||||| | |||| |||||| Sbjct 5498 CACGATCAAATCGTCGAACCTGTGCACCGAGATCATCGAGTACTCGGCTCCCGACGAGTG 5557 Query 94614 TGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTAC-ACGT 94672 ||||| || ||| ||| || ||| || | | ||| | | ||| || ||| Sbjct 5558 CGCTGTCTGCAACTTGGCTTCGATCGCGTTGCCGAGCTTCAT-CAAGA-----ACGGCGT 5611 Query 94673 CTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTGAACC 94732 ||| |||| | ||| | ||| | || || ||| | | || ||| Sbjct 5612 GTACGACTTC-AAAAAGCTGCACGAGGTCGTCAAGGTCG---------TTGCGTTTAACT 5661 Query 94733 TGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGA 94792 ||||| | | |||||| |||| |||||||||| |||||| | || || ||| | Sbjct 5662 TGAACCGCATCATCGACGTCAACTACTACCCCGTCATCGAGGCGCAAAATTCCAACTTCC 5721 Query 94793 AGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCG 94836 || || |||||||||||||| || || ||| |||| || ||| Sbjct 5722 GCCACCGCCCCATCGGCATCGGAGTGCAAGGTCTCGCCGATGCG 5765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722439363080