Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12- 23] 123 sequences; 24,532,870 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq36 104 2e-17 seq79 100 3e-16 seq31 96.9 3e-15 seq21 87.8 2e-12 >seq36 Length=1210608 Score = 104 bits (114), Expect = 2e-17 Identities = 484/752 (64%), Gaps = 21/752 (3%) Strand=Plus/Minus Query 153717 GCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAA---AC 153773 ||||| ||| |||||||| | || |||||||||||| || | |||| ||| || Sbjct 5464 GCGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGACCTGGGCCTCGAGGATCGCGTAC 5405 Query 153774 CTATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCG 153833 | | || | ||||| | | || | ||| ||||| | ||||| |||| Sbjct 5404 CAAAGC---TTTTGCGCGGGGATGGTCTTCTTGGCGCGACCCTCCTTTTCGTACTTCTCG 5348 Query 153834 TACAGT-CGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACA 153892 |||| ||| || ||| ||||||||| ||| ||||||||| || || || Sbjct 5347 AACAGGACGCGGAA-CTCTTCGCCGTAGACTTCGTGGAGGCCGGGGGCCTCGGCGGGGCA 5289 Query 153893 CATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAG 153952 | || | |||| || |||| | ||| || |||||||||||| || | |||||| Sbjct 5288 GAAGAGGGGCCACTCGCCGGCGGCCTCGACACGCTCCATGAACAGATCGGGGATCCAGAG 5229 Query 153953 CGCGTACATGAGGTCGCGCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTC--AGATTG 154010 ||| | | ||| || || || | || ||| ||| || | | || | || | Sbjct 5228 CGCAAAGAAGAGATCACGAGCGCGGACTTCTTCCTTGCCG-TGATTC-TTGCGAAGGTCC 5171 Query 154011 AGCA-CGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACG 154069 || | | | | ||| |||||||||||| || || | ||||| || | ||| || ||| Sbjct 5170 AGGAACTCGA-AGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACG 5112 Query 154070 CTTT---CCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTC 154126 ||| || || || ||||||| |||| | | |||||| ||||||||| |||||| | Sbjct 5111 CTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACGCGCAGCATGGGGAC 5052 Query 154127 CAGGCCGCTTGCGGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATG 154186 | ||| | | | |||||| || ||| | | |||| ||||| | | || Sbjct 5051 GATGCCATTCGAGTAGCCGTTCGTGCCGGCGATGTAGGAGCCGGTCGCGCGGATGTTGTG 4992 Query 154187 CACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCA-GTCGCCCAGCGTCC 154245 | | | | || || || ||| || ||| || ||| ||||| ||| ||||| Sbjct 4991 GATGCTTAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTG-AGCGTGT 4933 Query 154246 TGTAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCG 154305 ||||||||| || || ||||| | || |||||| ||||| | | |||| Sbjct 4932 CGTAGATGCCTTCAATCGAGTCGTCCTTCATCGTGACCAAGAAGCACGACGAGAGCTGCG 4873 Query 154306 GAATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAAC-AGTTTTTGGCTC 154364 | | || || || ||||| || || ||||| || || || | || | Sbjct 4872 GGTGAGGGGTACCGGCATTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGGA-C 4814 Query 154365 ATCATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACG 154424 || | | ||| | | | | || ||||| || | ||||| ||||||| ||||| Sbjct 4813 ATGAGGTTGTAGGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACA 4754 Query 154425 CGCATGAGCATGTGCTGCGGACGTTCGGCGAC 154456 |||||||||||||||||||||||||||||||| Sbjct 4753 CGCATGAGCATGTGCTGCGGACGTTCGGCGAC 4722 Score = 82.4 bits (90), Expect = 8e-11 Identities = 99/132 (75%), Gaps = 2/132 (2%) Strand=Plus/Minus Query 52698 TACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AAGTACTTCAA 52756 |||||||||||||| || || || ||||||| | | ||||| || ||| || || Sbjct 55431 TACATCGAGTTTGTTGCCGACCGATTGTTGGT-CGCTTTGGGCAACCCCAAGGTCTGGAA 55373 Query 52757 CGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTT 52816 ||| || || ||||| || ||||||| || ||||| |||||||| || ||||| || Sbjct 55372 TGCTGAGAACCCCTTTGACTTCATGAACATGATCTCGCTCGAGGGCAAAACAAACTTCTT 55313 Query 52817 CGAGAAGCGAGT 52828 ||||||||| || Sbjct 55312 CGAGAAGCGTGT 55301 >seq79 Length=1842920 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | ||||| |||||||| || || || | Sbjct 452108 GACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCG 452049 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| | ||||| ||||| || || || || || ||||| ||| | || | || | Sbjct 452048 AAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTC-CTGAATCTTGGCCTTGAC 451990 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | ||||| | |||||| ||||||| ||| | ||||||||| ||||| || | Sbjct 451989 GTTG-TCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTTTACCGGTCAGGGTCT 451931 Query 138599 TTACAAAAATCTGCAT 138614 | ||||| || ||||| Sbjct 451930 TGACAAAGATTTGCAT 451915 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | ||||| |||||||| || || || | Sbjct 452791 GACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCG 452732 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| | ||||| ||||| || || || || || ||||| ||| | || | || | Sbjct 452731 AAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTC-CTGAATCTTGGCCTTGAC 452673 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | ||||| | |||||| ||||||| ||| | ||||||||| ||||| || | Sbjct 452672 GTTG-TCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTTTACCGGTCAGGGTCT 452614 Query 138599 TTACAAAAATCTGCAT 138614 | ||||| || ||||| Sbjct 452613 TGACAAAGATTTGCAT 452598 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | ||||| |||||||| || || || | Sbjct 679084 GACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCG 679025 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| | ||||| ||||| ||||| || || || ||||| ||| || || | Sbjct 679024 AAGATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACG 678965 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||| | |||||| ||||||| ||| | |||||| || ||||| || || Sbjct 678964 TTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTG 678905 Query 138601 ACAAAAATCTGCAT 138614 || || || ||||| Sbjct 678904 ACGAAGATTTGCAT 678891 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | ||||| |||||||| || || || | Sbjct 451880 GACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCG 451821 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| | ||||| ||||| || || || || || ||||| ||| || || | Sbjct 451820 AAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACG 451761 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||| | |||||| ||||||| ||| | |||||| || ||||| || || Sbjct 451760 TTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTG 451701 Query 138601 ACAAAAATCTGCAT 138614 || || || ||||| Sbjct 451700 ACGAAGATTTGCAT 451687 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | ||||| |||||||| || || || | Sbjct 452336 GACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCG 452277 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| | ||||| ||||| || || || || || ||||| ||| || || | Sbjct 452276 AAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACG 452217 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||| | |||||| ||||||| ||| | |||||| || ||||| || || Sbjct 452216 TTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTG 452157 Query 138601 ACAAAAATCTGCAT 138614 || || || ||||| Sbjct 452156 ACGAAGATTTGCAT 452143 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || |||||||| || || || | Sbjct 678856 GACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCG 678797 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| | ||||| ||||| ||||| || || || ||||| ||| || || | Sbjct 678796 AAGATCAATCGCTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACG 678737 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||| | |||||| ||||||| ||| | ||| || |||||||| || || Sbjct 678736 TTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTCTTGCCAGTCAGGGTCTTG 678677 Query 138601 ACAAAAATCTGCAT 138614 || || || ||||| Sbjct 678676 ACGAAGATTTGCAT 678663 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/194 (70%), Gaps = 1/194 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | ||||| |||||||| || || || | Sbjct 452563 GACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCG 452504 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| | ||||| ||||| || || || || || ||||| ||| || || | Sbjct 452503 AAGATCAATCGCTGCTGGTCTGG-GGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACG 452445 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||| | |||||| ||||||| ||| | |||||| || ||||| || || Sbjct 452444 TTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTG 452385 Query 138601 ACAAAAATCTGCAT 138614 || || || ||||| Sbjct 452384 ACGAAGATTTGCAT 452371 >seq31 Length=897251 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| | || | || || || | | | ||||||||||| ||||||||||| Sbjct 114235 CCACCTCGGAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCG 114176 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || |||||||| || || |||| |||| ||||| || ||||| || || Sbjct 114175 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGG 114116 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| ||||| ||| || || | | || | ||||||| |||||| ||| Sbjct 114115 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 114056 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||| || | ||| || || || ||||| || || || || ||| || Sbjct 114055 TCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACGAAGATTTGCCTG 114008 >seq21 Length=1587489 Score = 87.8 bits (96), Expect = 2e-12 Identities = 155/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| || | || || || | | | ||||||||||| ||||||||||| Sbjct 1354139 CCACCGCGCAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCG 1354198 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| |||||||| || || |||| |||| ||||| || ||||| || || Sbjct 1354199 AGAGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGGGGA 1354258 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| ||||| ||| || || | | || | ||||||| ||||| ||| Sbjct 1354259 ATTCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGAGGACTCGACC 1354318 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCA 138613 |||| || | || || || || || || || || || || |||| Sbjct 1354319 TCGAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAAGATTTGCA 1354364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261636996560