Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12- 23] 123 sequences; 24,532,870 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq36 217 2e-51 >seq36 Length=1210608 Score = 217 bits (240), Expect = 2e-51 Identities = 562/850 (66%), Gaps = 15/850 (2%) Strand=Plus/Minus Query 116431 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 116490 ||||| || |||| || || |||| | ||| || | | | |||||| || || || Sbjct 5584 GCGATCGAAGCCAAGTTGCAGACAGCGCACTCGTCGGGAGCCGAGTACTCGATGATCTCG 5525 Query 116491 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 116550 || |||| || || || || ||||| | ||||||||| || |||||| |||| Sbjct 5524 GTGCACAGGTTCGACGATTTGATCGTGCCGAGGTTCTTTTGGTTCGACTTTTTGTTCGCG 5465 Query 116551 GCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 116610 || |||||||||||||| | || | || ||||| |||| || ||| || || | | Sbjct 5464 GCGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGACCTGGGCCTCGAGGATCGCGTAC 5405 Query 116611 CATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTA 116669 || | | | ||| | || | || ||||| || ||||||| |||||||| | | Sbjct 5404 CAAAGCTTTTGCG-CGGGGATGGTCTTCTTGGCGCGACCCTCCTTTTCGTACTTCTCGAA 5346 Query 116670 GAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAA 116729 ||| | |||||||| || | || ||| || || |||| | || ||||| Sbjct 5345 CAGGACGCGGAACTCTTCGCCGTAGACTTCGTGGAGGCCGGGGGCCTCGGCGGGGCAGAA 5286 Query 116730 GAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 116789 ||| | ||| | || | |||| || |||| |||||| || || |||||||||||||| Sbjct 5285 GAGGGGCCACTCGCCGGCGGCCTCGACACGCTCCATGAACAGATCGGGGATCCAGAGCGC 5226 Query 116790 CGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 116849 |||||||||| ||| ||| ||||||| | || ||||| || | |||| || Sbjct 5225 AAAGAAGAGATCACGAGCGCGGACTTCTTCCTTGCCGTGATTCTTGCGAAGGTCCAGGAA 5166 Query 116850 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGACG--- 116906 || | || || ||||||||||| || ||||| | ||||| | || | |||| Sbjct 5165 CTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCC---GGGACGCTT 5109 Query 116907 ---ACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGAT 116963 ||| | |||| || || | ||| || ||| | ||||| ||||| || | ||| Sbjct 5108 GTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACGCGCAGCATGGGGACGAT 5049 Query 116964 ACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTGTTGGCTCTGACATCGTGG 117021 |||| || | ||| || || || ||| || ||| | | | || | || | |||| Sbjct 5048 GCCATTCGAGTAGCCGTTCGTGCCGGCGATGTAGGAGCC--GGTCGCGCGGATGTTGTGG 4991 Query 117022 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCG 117081 ||| | ||| ||||| || || ||| ||||| | |||||| | |||| || || Sbjct 4990 ATGCTTAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCG 4931 Query 117082 TAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGC 117141 ||||| || || |||||||| |||| | | || | |||||| ||| | || || Sbjct 4930 TAGATGCCTTCAATCGAGTCGTCCTTCATCGTGACCAAGAAGCACGACGAGAGCTGCGGG 4871 Query 117142 CTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATC 117201 || ||||| || |||||||| || || | |||||| |||| | | |||||| Sbjct 4870 TGAGGGGTACCGGCATTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGGACATG 4811 Query 117202 TTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGC 117261 | ||||| || |||||| ||||| | ||||| || |||| | ||| ||| Sbjct 4810 AGGTTGTAGGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACACGC 4751 Query 117262 ATAAACATGT 117271 || | ||||| Sbjct 4750 ATGAGCATGT 4741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506256732680