Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12-
23] 123 sequences; 24,532,870 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq36 217 2e-51
>seq36
Length=1210608
Score = 217 bits (240), Expect = 2e-51
Identities = 562/850 (66%), Gaps = 15/850 (2%)
Strand=Plus/Minus
Query 116431 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 116490
||||| || |||| || || |||| | ||| || | | | |||||| || || ||
Sbjct 5584 GCGATCGAAGCCAAGTTGCAGACAGCGCACTCGTCGGGAGCCGAGTACTCGATGATCTCG 5525
Query 116491 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 116550
|| |||| || || || || ||||| | ||||||||| || |||||| ||||
Sbjct 5524 GTGCACAGGTTCGACGATTTGATCGTGCCGAGGTTCTTTTGGTTCGACTTTTTGTTCGCG 5465
Query 116551 GCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 116610
|| |||||||||||||| | || | || ||||| |||| || ||| || || | |
Sbjct 5464 GCGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGACCTGGGCCTCGAGGATCGCGTAC 5405
Query 116611 CATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTA 116669
|| | | | ||| | || | || ||||| || ||||||| |||||||| | |
Sbjct 5404 CAAAGCTTTTGCG-CGGGGATGGTCTTCTTGGCGCGACCCTCCTTTTCGTACTTCTCGAA 5346
Query 116670 GAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAA 116729
||| | |||||||| || | || ||| || || |||| | || |||||
Sbjct 5345 CAGGACGCGGAACTCTTCGCCGTAGACTTCGTGGAGGCCGGGGGCCTCGGCGGGGCAGAA 5286
Query 116730 GAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 116789
||| | ||| | || | |||| || |||| |||||| || || ||||||||||||||
Sbjct 5285 GAGGGGCCACTCGCCGGCGGCCTCGACACGCTCCATGAACAGATCGGGGATCCAGAGCGC 5226
Query 116790 CGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 116849
|||||||||| ||| ||| ||||||| | || ||||| || | |||| ||
Sbjct 5225 AAAGAAGAGATCACGAGCGCGGACTTCTTCCTTGCCGTGATTCTTGCGAAGGTCCAGGAA 5166
Query 116850 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGACG--- 116906
|| | || || ||||||||||| || ||||| | ||||| | || | ||||
Sbjct 5165 CTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCC---GGGACGCTT 5109
Query 116907 ---ACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGAT 116963
||| | |||| || || | ||| || ||| | ||||| ||||| || | |||
Sbjct 5108 GTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACGCGCAGCATGGGGACGAT 5049
Query 116964 ACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTGTTGGCTCTGACATCGTGG 117021
|||| || | ||| || || || ||| || ||| | | | || | || | ||||
Sbjct 5048 GCCATTCGAGTAGCCGTTCGTGCCGGCGATGTAGGAGCC--GGTCGCGCGGATGTTGTGG 4991
Query 117022 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCG 117081
||| | ||| ||||| || || ||| ||||| | |||||| | |||| || ||
Sbjct 4990 ATGCTTAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCG 4931
Query 117082 TAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGC 117141
||||| || || |||||||| |||| | | || | |||||| ||| | || ||
Sbjct 4930 TAGATGCCTTCAATCGAGTCGTCCTTCATCGTGACCAAGAAGCACGACGAGAGCTGCGGG 4871
Query 117142 CTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATC 117201
|| ||||| || |||||||| || || | |||||| |||| | | ||||||
Sbjct 4870 TGAGGGGTACCGGCATTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGGACATG 4811
Query 117202 TTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGC 117261
| ||||| || |||||| ||||| | ||||| || |||| | ||| |||
Sbjct 4810 AGGTTGTAGGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACACGC 4751
Query 117262 ATAAACATGT 117271
|| | |||||
Sbjct 4750 ATGAGCATGT 4741
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506256732680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |