Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12- 23] 123 sequences; 24,532,870 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq31 147 5e-30 seq21 143 6e-29 seq79 116 9e-21 >seq31 Length=897251 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | |||||| |||||||||||||||| ||||||||| || | ||| | ||||| Sbjct 114220 AGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGAGTGCGGCCATCC 114161 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||||||||||||||| |||||||| || || ||||| || Sbjct 114160 TCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCT 114101 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| ||||| | | || || || | ||||||||| Sbjct 114100 TGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTC 114041 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| ||||| || || || ||||| Sbjct 114040 TTGCCCGTAAGAGTCTTGACGAAGATTTG 114012 >seq21 Length=1587489 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | |||||| |||||||||||||||| ||||||||| || | ||| | ||||| Sbjct 1354154 AGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGAGTACGGCCATCC 1354213 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||||||||||||||| |||||||| || ||||||||| || Sbjct 1354214 TCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGGGGAATTCCTTCCTTGTCT 1354273 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| ||||| | | || || || | ||||| ||| Sbjct 1354274 TGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGAGGACTCGACCTCGAGGGTGATGGTC 1354333 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || || || || ||||| Sbjct 1354334 TTGCCCGTAAGGGTCTTGACGAAGATTTG 1354362 >seq79 Length=1842920 Score = 116 bits (128), Expect = 9e-21 Identities = 142/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492 ||||||||||| |||| ||||||||| || | || | ||||| || |||||||| || Sbjct 452111 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCA 452052 Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552 |||||||| | ||||||||||| || || || || ||||||||||| ||| Sbjct 452051 GCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTG 451992 Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTT 199612 ||| |||| ||||| | | || || || | ||||||||| ||||| || || || Sbjct 451991 ACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTTTACCGGTCAGGGTC 451932 Query 199613 TTCACAAAAATTTG 199626 || ||||| ||||| Sbjct 451931 TTGACAAAGATTTG 451918 Score = 116 bits (128), Expect = 9e-21 Identities = 142/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492 ||||||||||| |||| ||||||||| || | || | ||||| || |||||||| || Sbjct 452794 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCA 452735 Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552 |||||||| | ||||||||||| || || || || ||||||||||| ||| Sbjct 452734 GCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTG 452675 Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTT 199612 ||| |||| ||||| | | || || || | ||||||||| ||||| || || || Sbjct 452674 ACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTTTACCGGTCAGGGTC 452615 Query 199613 TTCACAAAAATTTG 199626 || ||||| ||||| Sbjct 452614 TTGACAAAGATTTG 452601 Score = 113 bits (124), Expect = 1e-19 Identities = 151/209 (72%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | |||||| ||||||||||| |||| ||| ||||| || | || | ||||| Sbjct 453036 AGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTATAGTCGGCGAGCGTACGGCCATCC 452977 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || |||||||| | ||||||||||| || | ||| || | ||| Sbjct 452976 TCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGATGCCCTCCTTG-TCC 452918 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| |||| ||||| | | || || || | ||||||||| Sbjct 452917 TGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTT 452858 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || || ||||| Sbjct 452857 TTGCCGGTCAGGGTCTTGACGAAGATTTG 452829 Score = 111 bits (122), Expect = 4e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492 ||||||||||| |||| ||||||||| || | || | ||||| || |||||||| || Sbjct 678859 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCA 678800 Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552 |||||||| | ||||||||||| ||| || || || ||||| ||||| ||| Sbjct 678799 GCGAAGATCAATCGCTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 678740 Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTT 199612 ||| |||| ||||| | | || || || | |||||||||||| || || || || Sbjct 678739 ACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTCTTGCCAGTCAGGGTC 678680 Query 199613 TTCACAAAAATTTG 199626 || || || ||||| Sbjct 678679 TTGACGAAGATTTG 678666 Score = 111 bits (122), Expect = 4e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492 ||||||||||| |||| ||||||||| || | || | ||||| || |||||||| || Sbjct 679087 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCA 679028 Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552 |||||||| | ||||||||||| ||| ||| || || ||||| ||||| ||| Sbjct 679027 GCGAAGATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 678968 Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTT 199612 ||| |||| ||||| | | || || || | ||||||||| || || || || || Sbjct 678967 ACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTC 678908 Query 199613 TTCACAAAAATTTG 199626 || || || ||||| Sbjct 678907 TTGACGAAGATTTG 678894 Score = 111 bits (122), Expect = 4e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492 ||||||||||| |||| |||||||| || | || | ||||| || |||||||| || Sbjct 679315 GTCGACTCCTTCTGGATATTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCA 679256 Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552 |||||||| | ||||||||||| ||| || || || ||||||||||| ||| Sbjct 679255 GCGAAGATCAATCGCTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTG 679196 Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTT 199612 ||| |||| ||||| | | || || || | ||||||||| || || || || || Sbjct 679195 ACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTC 679136 Query 199613 TTCACAAAAATTTG 199626 || ||||| ||||| Sbjct 679135 TTGACAAAGATTTG 679122 Score = 107 bits (118), Expect = 5e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492 ||||||||||| |||| ||||||||| || | || | ||||| || |||||||| || Sbjct 451883 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCA 451824 Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552 |||||||| | ||||||||||| || || || || ||||| ||||| |||| Sbjct 451823 GCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTC 451764 Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTT 199612 ||| |||| ||||| | | || || || | ||||||||| || || || || || Sbjct 451763 ACGTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTC 451704 Query 199613 TTCACAAAAATTTG 199626 || || || ||||| Sbjct 451703 TTGACGAAGATTTG 451690 Score = 107 bits (118), Expect = 5e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492 ||||||||||| |||| ||||||||| || | || | ||||| || |||||||| || Sbjct 452339 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCA 452280 Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552 |||||||| | ||||||||||| || || || || ||||| ||||| |||| Sbjct 452279 GCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTC 452220 Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTT 199612 ||| |||| ||||| | | || || || | ||||||||| || || || || || Sbjct 452219 ACGTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTC 452160 Query 199613 TTCACAAAAATTTG 199626 || || || ||||| Sbjct 452159 TTGACGAAGATTTG 452146 Score = 107 bits (118), Expect = 5e-18 Identities = 141/194 (73%), Gaps = 1/194 (1%) Strand=Plus/Minus Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492 ||||||||||| |||| ||||||||| || | || | ||||| || |||||||| || Sbjct 452566 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCA 452507 Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552 |||||||| | ||||||||||| || | ||| || | ||||| ||||| |||| Sbjct 452506 GCGAAGATCAATCGCTGCTGGTCTGGGGGATGCCCTCCTTG-TCCTGGATCTTGGCCTTC 452448 Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTT 199612 ||| |||| ||||| | | || || || | ||||||||| || || || || || Sbjct 452447 ACGTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTC 452388 Query 199613 TTCACAAAAATTTG 199626 || || || ||||| Sbjct 452387 TTGACGAAGATTTG 452374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178919742093241