Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12- 23] 123 sequences; 24,532,870 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq79 159 4e-34 seq31 134 2e-26 seq21 123 3e-23 >seq79 Length=1842920 Score = 159 bits (176), Expect = 4e-34 Identities = 167/217 (77%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||||| ||||| || |||||| |||||||||||||||| || || || | Sbjct 679334 ACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATATTGTAGTCGGCGAGCGTACGGCC 679275 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || |||||||||||||| ||||| ||||| ||||||||||| | || | || |||||| Sbjct 679274 ATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGGGATGCCCTCCTT 679215 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 |||| ||||| ||||| ||| | | | |||||| ||| || || || | ||||| Sbjct 679214 GTCCTGAATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGA 679156 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||||||| ||||| || || |||||||||||||| Sbjct 679155 TCGTTTTGCCGGTCAGGGTCTTGACAAAGATTTGCAT 679119 Score = 154 bits (170), Expect = 2e-32 Identities = 166/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||||| ||||| || |||||| ||||| |||||||||| || ||||| | Sbjct 678878 ACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCC 678819 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || |||||||||||||| ||||| ||||| ||||||||||| | || | || |||||| Sbjct 678818 ATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGGGATGCCCTCCTT 678759 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 |||| |||||| ||||| ||| | | | |||||| ||| || || || | ||||| Sbjct 678758 GTCCTGGATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGA 678700 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || ||||| ||||| || || || ||||||||||| Sbjct 678699 TCGTCTTGCCAGTCAGGGTCTTGACGAAGATTTGCAT 678663 Score = 154 bits (170), Expect = 2e-32 Identities = 166/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||||| ||||| || |||||| ||||| |||||||||| || || || | Sbjct 679106 ACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCC 679047 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || |||||||||||||| ||||| ||||| ||||||||||| | || | || |||||| Sbjct 679046 ATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTT 678987 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 |||| |||||| ||||| ||| | | | |||||| ||| || || || | ||||| Sbjct 678986 GTCCTGGATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGA 678928 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||||||| ||||| || || || ||||||||||| Sbjct 678927 TCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 678891 Score = 150 bits (166), Expect = 2e-31 Identities = 165/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||||| ||||| || |||||| ||||| |||||||||| || || || | Sbjct 451902 ACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCC 451843 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || |||||||||||||| ||||| ||||| ||||||||||| | || | || |||||| Sbjct 451842 ATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTT 451783 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 |||| |||||| ||| | ||| | | | |||||| ||| || || || | ||||| Sbjct 451782 GTCCTGGATCTTGGCCTTCA-CGTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGA 451724 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||||||| ||||| || || || ||||||||||| Sbjct 451723 TCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 451687 Score = 150 bits (166), Expect = 2e-31 Identities = 165/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||||| ||||| || |||||| ||||| |||||||||| || || || | Sbjct 452130 ACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCC 452071 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || |||||||||||||| ||||| ||||| ||||||||||| | || | || |||||| Sbjct 452070 ATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTT 452011 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 |||| ||||| ||||| ||| | | | |||||| ||| || || || | ||||| Sbjct 452010 GTCCTGAATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGA 451952 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | ||||| || ||||| || || |||||||||||||| Sbjct 451951 TCGTTTTACCGGTCAGGGTCTTGACAAAGATTTGCAT 451915 Score = 150 bits (166), Expect = 2e-31 Identities = 165/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||||| ||||| || |||||| ||||| |||||||||| || || || | Sbjct 452358 ACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCC 452299 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || |||||||||||||| ||||| ||||| ||||||||||| | || | || |||||| Sbjct 452298 ATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTT 452239 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 |||| |||||| ||| | ||| | | | |||||| ||| || || || | ||||| Sbjct 452238 GTCCTGGATCTTGGCCTTCA-CGTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGA 452180 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||||||| ||||| || || || ||||||||||| Sbjct 452179 TCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 452143 Score = 150 bits (166), Expect = 2e-31 Identities = 165/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||||| ||||| || |||||| ||||| |||||||||| || || || | Sbjct 452813 ACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCC 452754 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || |||||||||||||| ||||| ||||| ||||||||||| | || | || |||||| Sbjct 452753 ATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTT 452694 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 |||| ||||| ||||| ||| | | | |||||| ||| || || || | ||||| Sbjct 452693 GTCCTGAATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGA 452635 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | ||||| || ||||| || || |||||||||||||| Sbjct 452634 TCGTTTTACCGGTCAGGGTCTTGACAAAGATTTGCAT 452598 Score = 147 bits (162), Expect = 2e-30 Identities = 165/217 (76%), Gaps = 3/217 (1%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||||| ||||| || |||||| ||||| |||||||||| || || || | Sbjct 452585 ACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCC 452526 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || |||||||||||||| ||||| ||||| ||||||||||| | || | || |||||| Sbjct 452525 ATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTG-GGGGATGCCCTCCTT 452467 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 |||| |||||| ||| | ||| | | | |||||| ||| || || || | ||||| Sbjct 452466 GTCCTGGATCTTGGCCTTCA-CGTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGA 452408 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||||||| ||||| || || || ||||||||||| Sbjct 452407 TCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 452371 Score = 134 bits (148), Expect = 2e-26 Identities = 148/193 (77%), Gaps = 3/193 (2%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| || ||||||| || || || | || |||||||||||||| ||||| Sbjct 453016 CTCCTTCTGGATGTTATAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAA 452957 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| ||||||||||| | || | || |||||||||| ||||| ||||| ||| Sbjct 452956 GATCAATCGCTGCTGGTCTG-GGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGA-CGT 452899 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| ||| || || || | |||||| |||||||| ||||| || || | Sbjct 452898 TGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGA 452839 Query 46581 CAAAGATTTGCAT 46593 | ||||||||||| Sbjct 452838 CGAAGATTTGCAT 452826 >seq31 Length=897251 Score = 134 bits (148), Expect = 2e-26 Identities = 146/191 (76%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| |||||||| | |||||||| | || |||||||||||||||||||| Sbjct 114200 CTCCTTTTGGATGTTGTAGTCCGCGAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 114141 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | || |||||||| | ||| | || |||||||| |||||| ||||| ||| Sbjct 114140 GATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGA-CGT 114082 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||||| ||| || || || | ||||| || |||||||| || || || | Sbjct 114081 TGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGA 114022 Query 46581 CAAAGATTTGC 46591 | ||||||||| Sbjct 114021 CGAAGATTTGC 114011 >seq21 Length=1587489 Score = 123 bits (136), Expect = 3e-23 Identities = 144/192 (75%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| |||||||| | ||||| || | || |||||||||||||||||||| Sbjct 1354174 CTCCTTTTGGATGTTGTAGTCCGCGAGAGTACGGCCATCCTCGAGCTGCTTGCCGGCGAA 1354233 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | || |||||||| | || | | |||||||| |||||| ||||| ||| Sbjct 1354234 GATGAGACGTTGCTGGTCTGGGGGAATTCCTTCCTTGTCTTGGATCTTGGCCTTGA-CGT 1354292 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||||| || || || || | |||||||| |||||||| || || || | Sbjct 1354293 TGTCGATCGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTAAGGGTCTTGA 1354352 Query 46581 CAAAGATTTGCA 46592 | |||||||||| Sbjct 1354353 CGAAGATTTGCA 1354364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565237530945960