Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12- 23] 123 sequences; 24,532,870 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq36 158 1e-33 seq21 150 2e-31 seq79 132 5e-26 seq31 131 2e-25 >seq36 Length=1210608 Score = 158 bits (174), Expect = 1e-33 Identities = 169/223 (76%), Gaps = 3/223 (1%) Strand=Plus/Plus Query 133218 GATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTC 133277 |||||| || ||||| ||||| || || ||| | ||| || || | ||| ||||| Sbjct 56264 GATTTGGAAACCGTAGAAGCATCGAGCTTCGGCGGACTGGACCTCACCGGAGAACCGCTC 56323 Query 133278 GACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGAT 133337 ||||| || |||||||||||||||||| |||||||| ||||| || |||||| ||| Sbjct 56324 GACCAAGTTCTCGTTGACGATGCCGTCGGACGCGGCGAAGAAGGCGAGGACGTGCGAGAT 56383 Query 133338 GAAATGGCGCTCGTTG---TCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTC 133394 ||| | |||||||| | | | | | ||||||||| || |||||||||||| ||| Sbjct 56384 GAAGTAGCGCTCGTCGGGCTTGAGCTTGTTGTCCCAGTCGTGCATGTCCTTGGACAAGTC 56443 Query 133395 CACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTAC 133437 || ||| ||| ||||||| || || |||||||| || |||||| Sbjct 56444 CATCTCTTCGGCGGTCCAGAAGGATGCCTCGGCCTTCTTGTAC 56486 >seq21 Length=1587489 Score = 150 bits (166), Expect = 2e-31 Identities = 164/215 (76%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 38245 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCG 38304 ||||||| ||||| || || || |||||||| ||||||||| |||| |||||| || ||| Sbjct 1354364 TGCAAATCTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCG 1354305 Query 38305 ACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 ||| | | |||| | || | || |||| ||||| || ||||||||| | ||||| Sbjct 1354304 ACACGATCGACAACG-TCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCAG 1354246 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || ||||| | ||| ||||| ||||| || || | || || ||| ||||||||| Sbjct 1354245 CAACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACTCTCGCGGACTACAAC 1354186 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||||| |||| || || |||||||| || Sbjct 1354185 ATCCAAAAGGAGTCGACCCTCCACTTGGTGCTCCG 1354151 Score = 138 bits (152), Expect = 1e-27 Identities = 166/225 (74%), Gaps = 3/225 (1%) Strand=Plus/Plus Query 133218 GATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTC 133277 ||| |||||||| |||||||||| |||||| | | |||||| || | ||| | ||| Sbjct 346837 GATCTGAAAGCCATAAAAGCACCTCGCCTCTGCGAACTGCACCTCACTCGAGAACCTCTC 346896 Query 133278 GACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGAT 133337 ||||| ||| || || |||| |||||| |||||||||||||| || || || ||| Sbjct 346897 GACCAAATTCTCATTCACGACGCCGTCCGAAGCGGCGAAAAAGGCGAGTACATGGGCGAT 346956 Query 133338 GAAATGGCGCTCGTTGTCGTT---CAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTC 133394 ||| | ||| |||| || ||| | | | | ||||||| | ||| ||| ||||| Sbjct 346957 GAAGTAGCGTTCGTCGTTGTTGAGCTTGTGGTGCCAGTCGTGGAGGTCGTTGCCGAGGTC 347016 Query 133395 CACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | ||| ||| ||| |||||| ||||||| ||||| ||||||||| Sbjct 347017 GATCTCTTCGGCGGACCAAAAGGACGCCTGGGCTTGTTTGTACAT 347061 >seq79 Length=1842920 Score = 132 bits (146), Expect = 5e-26 Identities = 161/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || |||||||| ||||| |||| |||||| | | Sbjct 678891 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTCGAGTCGTCG 678950 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| ||||| ||||| | ||||| Sbjct 678951 GACACGATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCAGACCA 679009 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | ||| ||||| ||||| || || | || || ||| ||||||||| Sbjct 679010 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAA 679069 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| ||||| |||| |||||||| ||| Sbjct 679070 CATCCAGAAGGAGTCGACGTTGCACTTGGTGCTCCGT 679106 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || |||||||| ||||| |||| || ||| | | Sbjct 451687 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTTGAGTCGTCG 451746 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| ||||| || ||| | ||||| Sbjct 451747 GACACGATCGACAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCA 451805 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | ||| ||||| ||||| || || | || || ||| ||||||||| Sbjct 451806 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAA 451865 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| ||||| |||| |||||||| ||| Sbjct 451866 CATCCAGAAGGAGTCGACGTTGCACTTGGTGCTCCGT 451902 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || |||||||| ||||| |||| || ||| | | Sbjct 452143 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTTGAGTCGTCG 452202 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| ||||| || ||| | ||||| Sbjct 452203 GACACGATCGACAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCA 452261 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | ||| ||||| ||||| || || | || || ||| ||||||||| Sbjct 452262 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAA 452321 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| ||||| |||| |||||||| ||| Sbjct 452322 CATCCAGAAGGAGTCGACGTTGCACTTGGTGCTCCGT 452358 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| || ||||| |||| |||||| | | Sbjct 678663 ATGCAAATCTTCGTCAAGACCCTGACTGGCAAGACGATCACGCTCGAGGTCGAGTCGTCG 678722 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| ||||| || || | ||||| Sbjct 678723 GACACGATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCAGACCA 678781 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | ||| ||||| ||||| || || | ||||| ||| ||||||||| Sbjct 678782 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAA 678841 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| ||||| |||| |||||||| ||| Sbjct 678842 CATCCAGAAGGAGTCGACGTTGCACTTGGTGCTCCGT 678878 Score = 123 bits (136), Expect = 2e-23 Identities = 160/217 (74%), Gaps = 3/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || |||||||| ||||| |||| || ||| | | Sbjct 452371 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTTGAGTCGTCG 452430 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| ||||| || ||| | ||||| Sbjct 452431 GACACGATCGACAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCC-CAGACCA 452488 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | ||| ||||| ||||| || || | || || ||| ||||||||| Sbjct 452489 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAA 452548 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| ||||| |||| |||||||| ||| Sbjct 452549 CATCCAGAAGGAGTCGACGTTGCACTTGGTGCTCCGT 452585 Score = 118 bits (130), Expect = 1e-21 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || || || || ||||| ||||| |||| |||||| | | Sbjct 451915 ATGCAAATCTTTGTCAAGACCCTGACCGGTAAAACGATCACGCTCGAGGTCGAGTCGTCG 451974 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || || | ||||| ||||| || ||| | ||||| Sbjct 451975 GACACGATCGACAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCA 452033 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | ||| ||||| ||||| || || | || || ||| ||||||||| Sbjct 452034 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAA 452093 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| ||||| |||| |||||||| ||| Sbjct 452094 CATCCAGAAGGAGTCGACGTTGCACTTGGTGCTCCGT 452130 Score = 118 bits (130), Expect = 1e-21 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || || || || ||||| ||||| |||| |||||| | | Sbjct 452598 ATGCAAATCTTTGTCAAGACCCTGACCGGTAAAACGATCACGCTCGAGGTCGAGTCGTCG 452657 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || || | ||||| ||||| || ||| | ||||| Sbjct 452658 GACACGATCGACAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCA 452716 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | ||| ||||| ||||| || || | || || ||| ||||||||| Sbjct 452717 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAA 452776 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| ||||| |||| |||||||| ||| Sbjct 452777 CATCCAGAAGGAGTCGACGTTGCACTTGGTGCTCCGT 452813 >seq31 Length=897251 Score = 131 bits (144), Expect = 2e-25 Identities = 161/215 (75%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 38246 GCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGA 38305 |||||| ||||| || || || |||||||| || |||||| |||| |||||| | |||| Sbjct 114011 GCAAATCTTCGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 114070 Query 38306 CAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCAA 38363 || | | |||| | || | || |||| ||||| || || || |||||| ||||| Sbjct 114071 CACGATCGACAACG-TCAAGGCCAAGATCCAAGACAAGGAAGGCAT-CCCGCCAGACCAG 114128 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || ||||| | ||| ||||| ||||| || || | ||||| ||| ||||||||| Sbjct 114129 CAACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCGGACTACAAC 114188 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||||| |||| || || ||||| || || Sbjct 114189 ATCCAAAAGGAGTCGACCCTCCACTTGGTCCTCCG 114223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172030984320