Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12- 23] 123 sequences; 24,532,870 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq36 154 2e-32 seq55 136 5e-27 seq21 127 3e-24 seq44 107 2e-18 >seq36 Length=1210608 Score = 154 bits (170), Expect = 2e-32 Identities = 524/807 (65%), Gaps = 21/807 (3%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| ||||| ||||||| ||||| |||| ||||| || | || || || || Sbjct 4734 CCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGACATCGAGCGCGTC 4793 Query 111672 TTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 ||| || | ||| || |||||| | | || |||| |||||| | || || ||||| Sbjct 4794 TTGCAGTCCTACAACCTCATGTCCGAGCGCTAC-TTCACCCACGCCTCGCCGACGCTCTT 4852 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 ||| || ||||| || || || | || || ||| | | | | ||||| || Sbjct 4853 CAATGCCGGTACCCCTCACCCGCAGCTCTCGTCGTGCTTCTTGGTCACGATGAAGGACGA 4912 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 || || | ||||| |||| ||| |||| || || | ||||| ||| || || Sbjct 4913 CTCGATTGAAGGCATCTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAGACCGCCGG 4972 Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGT--ATTAGAGGTACA 111908 ||||||||| | |||||| | || | || | | | ||| | || || || Sbjct 4973 TGGTATCGGTTTAAGCATCCACAACATCCGCGCGACC--GGCTCCTACATCGCCGGCACG 5030 Query 111909 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968 || || | || |||| || | || ||||| ||||| | ||| ||| |||||||| Sbjct 5031 AACGGCTACTCGAATGGCATCGTCCCCATGCTGCGCGTCTACAACAACACCGCGCGCTAC 5090 Query 111969 GTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 112022 || |||||| ||| ||||| | ||| | |||| |||| || ||||| ||| Sbjct 5091 GTCGACCAAGGTGGCAACAAGCGTCCC---GGAGCCTTCGCGATCTACCTCGAGCCGTGG 5147 Query 112023 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CGC 112080 ||||| || || | |||||||| || | || || || || | || || | ||| Sbjct 5148 CACGCCGACGTCTTCGAGTTCCTGGACCTTCGCAAGAATCACGGCAAGGAAGAAGTCCGC 5207 Query 112081 GGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 112140 | | || |||||||||| || |||||||| || ||||| |||||| || | || |||| Sbjct 5208 GCT--CGTGATCTCTTCTTTGCGCTCTGGATCCCCGATCTGTTCATGGAGCGTGTCGAGG 5265 Query 112141 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGG 112200 ||| | ||| | ||||| || || | | |||| ||||| ||| ||| | | | Sbjct 5266 CCGCCGGCGAGTGGCCCCTCTTCTGCCCCGCCGAGGCCCCCGGCCTCCACGAAGTCTACG 5325 Query 112201 GTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGG 112260 | || ||||| | ||| | | |||||||| | || |||| || | ||| Sbjct 5326 GCGAAGAGTTCCGCGTCCTGTTCGAGAAGTACGAAAAGGAGGGTCGCGCCAAGAAGACCA 5385 Query 112261 TGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 112319 | || || || | | | ||| | || || ||| || | || |||||| || | || Sbjct 5386 TCCCCGC-GCAAAAGCTTTGGTACGCGATCCTCGAGGCCCAGGTCGAGACCGGCAACCCC 5444 Query 112320 TATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 112379 | ||||| ||||| |||||| ||| ||||| || |||||||| | || |||| Sbjct 5445 TTCATGCTCTACAAGGACGCCGCGAACAAAAAGTCGAACCAAAAGAACCTCGGCACGATC 5504 Query 112380 AAGAGTTCCAACCTCTGTACAGAAATC 112406 || || ||||| || || || ||| Sbjct 5505 AAATCGTCGAACCTGTGCACCGAGATC 5531 >seq55 Length=958678 Score = 136 bits (150), Expect = 5e-27 Identities = 271/395 (69%), Gaps = 5/395 (1%) Strand=Plus/Minus Query 13592 CCGCATCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 13651 |||| |||| |||||||| | || ||| ||| || ||||| ||| | || ||| Sbjct 914250 CCGCTTCTACCAAGCCTCGACCTCCGAGCTGTACGGCAAGGTCGTCGAGACCCCTCAATC 914191 Query 13652 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 13711 ||| ||| ||||||||||| || ||| ||||||||| | ||| | || || Sbjct 914190 CGAAACGACGCCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGCCTTCTG 914131 Query 13712 GCTCGTAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCAA 13771 | |||| ||||| ||||||||||| |||| ||| || ||| || ||||||||||| Sbjct 914130 GATCGTCAAGAACTACCGCGAGTCATACGACATGTACGCGTGCAATGGTATCCTCTTCAA 914071 Query 13772 CCATGAATCACCGAGACGAGGT-GCAGACTTTGTGACCATGAAGATTAC-CGAGGGTATC 13829 ||| || || || | || ||| ||| ||| || || | ||||||| | ||| | | || Sbjct 914070 CCACGAGTCCCCACGTCGTGGTCGCA-CCTTCGTCACGAGGAAGATTTCGCGA-GCTGTC 914013 Query 13830 AAACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGA 13889 | ||| ||| || |||| | | | | | || ||||| | || || | Sbjct 914012 GCCGAGATCTCACTCGGTCAACAGGACTGCCTCTACCTCGGCAACATGGAGGCCAAGCGT 913953 Query 13890 GATTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAA 13949 |||||||| || ||| |||||||| || | |||||| | |||||||| || || | Sbjct 913952 GATTGGGGACATGCGCGCGACTATGTCGAGGGCATGTGGATGATGCTTCAGCAGGA-CAC 913894 Query 13950 GCCGACGAATATGTAGTAGCAACGGGTGAGACCCA 13984 ||||||| | ||| | || |||||||||||||| Sbjct 913893 CCCGACGACTTTGTTCTCGCGACGGGTGAGACCCA 913859 >seq21 Length=1587489 Score = 127 bits (140), Expect = 3e-24 Identities = 250/361 (69%), Gaps = 14/361 (4%) Strand=Plus/Minus Query 176722 ATTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAG 176781 ||||| || | ||||||||||||||| || |||| ||| ||| | |||||||||||| Sbjct 553123 ATTGATGATCAAACCCTTGATGTGGGATCCATCGTGATCCTGATCGGCCATGATCATGAG 553064 Query 176782 ACGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGAT 176841 || || || ||| | || || || | || ||||| || ||||||||||| Sbjct 553063 CTTGCCGTAACGGAGCGAGTCGACGTCGGTGTAAACTTTGCCCTGCTGCAGACCCAAGAT 553004 Query 176842 CTTCTTGAGATCG-TTGAACTCTTGGTTTGATGT-GAGCTGTG---TGACAGAGGCATCA 176896 || ||| ||||| ||||| ||| || | ||| |||| | || | | || ||| Sbjct 553003 CTGCTT--GATCGCTTGAA-TCTCGGCAT--TGTCGAGCAAGGCCTTGCCCGCCGCTTCA 552949 Query 176897 CGAACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACA 176956 || || || |||| || || | || |||||||| |||| || ||||| || || Sbjct 552948 CGCACGTTGAGCAACTTTCCTCGCAAGGGAAAGACACCATAGTTGTCTCGACCGACGACG 552889 Query 176957 GAGAGACCCGCAACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACAC 177016 | ||||| | || ||||||| ||| |||||||| || || |||| |||||| || ||| Sbjct 552888 GCCAGACCGGACACGGCGAGCGCTTTGGCAGAATCTCCTTCGGTCAAGATGAGCGTGCAC 552829 Query 177017 TTG--CCAGATTGTGCCGTACCCGCCTTGTTCGCATCATCCAATTTGGGAATACCAGTAA 177074 ||| || | | | ||| || || ||||||||||| || | ||| ||||| | || Sbjct 552828 TTGGACCCGTTCCT--CGTTCCAGCGTTGTTCGCATCCTCGAGCTTGACGATACCCGAAA 552771 Query 177075 T 177075 | Sbjct 552770 T 552770 Score = 89.7 bits (98), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 102246 TGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGT 102305 ||||||||||| ||||| |||||||| || ||||| |||||||||||||| ||||| || Sbjct 346361 TGGCTCAAGAAACGAGGCCTCATGCCCGGCCTCTGTTTCTCCAACGAGCTCATCTCCCGC 346302 Query 102306 GACGAGGGACTCCA 102319 ||||| || ||||| Sbjct 346301 GACGAAGGTCTCCA 346288 >seq44 Length=493270 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 13592 CCGCATCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 13651 |||| |||| || ||||| | || ||| ||| || ||||| ||| | || || Sbjct 207472 CCGCTTCTACCAGGCCTCGACGTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTC 207413 Query 13652 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 13711 |||| ||| ||||||||||| |||||| |||||||||| | ||| | || || Sbjct 207412 CGAGACGACCCCCTTCTACCCTCGCTCGCCCTACGGAGTCGCCAAGTTGTACGCCTTCTG 207353 Query 13712 GCTCGTAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCAA 13771 | |||| ||||| ||||||||||| |||| |||| || ||| ||| ||||||||||| Sbjct 207352 GATCGTCAAGAACTACCGCGAGTCGTACGACATGTTCGCGTGCAACGGTATCCTCTTCAA 207293 Query 13772 CCATGAATCACC 13783 ||| || || || Sbjct 207292 CCACGAGTCCCC 207281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741445608560