Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12-
23] 123 sequences; 24,532,870 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq44 150 1e-31
>seq44
Length=493270
Score = 150 bits (166), Expect = 1e-31
Identities = 239/340 (70%), Gaps = 2/340 (1%)
Strand=Plus/Plus
Query 30045 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCAC 30104
||||||||| || | || ||||| | |||||| ||||| | | ||||| | ||
Sbjct 153386 GGGGTTCCAAGCACTCAAAATGATCCTCCTGTCGGTGGGGTTCTCCTTGATGCTCTTGAC 153445
Query 30105 GGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCAT-GTCCGTGTACT 30163
| | || |||||| |||||| ||| || || || | |||| | ||||
Sbjct 153446 AACCTGCATCAACTGATCGACCCCCTCGCCCTGATAATCATCCTTGGCCGTCC-TATACT 153504
Query 30164 CTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGT 30223
|||| || |||||||||||||| ||||| || ||||| |||| || ||||||||||| |
Sbjct 153505 CTGCCCCAAAATGCCTCCACTGAAACCCATAAACCGGCCCCAAATCCCCCTCTTCCCTAT 153564
Query 30224 GCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCC 30283
|| | || || ||| ||||| || || | || || || | ||||| ||||| ||||
Sbjct 153565 GCCCCAACCCAACCTTCTCCAAGAACTCCTTCGAGCCATTCCCATCCCAAATCTTGACCC 153624
Query 30284 CCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCA 30343
|||| ||||| | | ||| || | || || |||| ||||||||||| || ||||| |
Sbjct 153625 CCTTGTCGGACAACAATTTCGAATCAGTCGATCCTCGAACGAACCACAGGAGTTCCTCAA 153684
Query 30344 CGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383
|| | | | ||||||| |||||||||| | |||||
Sbjct 153685 TGATGCCTCGCGTAAAGACCTTCTTGGTCGTCAAAAGGGG 153724
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408616987456679
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |