Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12- 23] 123 sequences; 24,532,870 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq79 82.4 6e-11 >seq79 Length=1842920 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | |||||| || | ||| ||| || || || ||||| || | || | || Sbjct 452132 AGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGG 452073 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | |||||| || || || |||| |||||| || || | ||| | ||||||| Sbjct 452072 CCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCC 452013 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| || || | | | || |||| ||| ||||| | ||| Sbjct 452012 TTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTG 451953 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||||||| || |||| || || ||||| || ||||| Sbjct 451952 ATCGTTTTACCGGTCAGGGTCTTGACAAAGATTTGCAT 451915 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | |||||| || | ||| ||| || || || ||||| || | || | || Sbjct 452815 AGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGG 452756 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | |||||| || || || |||| |||||| || || | ||| | ||||||| Sbjct 452755 CCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCC 452696 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| || || | | | || |||| ||| ||||| | ||| Sbjct 452695 TTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTG 452636 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||||||| || |||| || || ||||| || ||||| Sbjct 452635 ATCGTTTTACCGGTCAGGGTCTTGACAAAGATTTGCAT 452598 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | |||||| || | ||| ||| || || |||||||| || | || | || Sbjct 679336 AGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATATTGTAGTCGGCGAGCGTACGG 679277 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | |||||| || || || |||| |||||| || || | || | ||||||| Sbjct 679276 CCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGGGATGCCCTCC 679217 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| || || | | | || |||| ||| ||||| | ||| Sbjct 679216 TTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTG 679157 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||||||| || |||| || || ||||| || ||||| Sbjct 679156 ATCGTTTTGCCGGTCAGGGTCTTGACAAAGATTTGCAT 679119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937028950729