Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12-
23] 123 sequences; 24,532,870 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq36 206 5e-48
>seq36
Length=1210608
Score = 206 bits (228), Expect = 5e-48
Identities = 789/1227 (64%), Gaps = 24/1227 (2%)
Strand=Plus/Minus
Query 213192 GCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTG 213251
|||| ||||| || | || | || |||| ||||||||| || || |||| | |||||
Sbjct 5872 GCCATGTCGCACGAAGACTCGATCGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTG 5813
Query 213252 AGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGC 213311
||||| ||||| || || ||| |||||| || | |||| |||| || ||
Sbjct 5812 AGCTTGCGCGCCTCAGGCGAATCGAACGGCATCGCCAAGGCCATGAACGCATCGGCGAGA 5753
Query 213312 CCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAA 213370
|| || || |||||||||||||| | ||| | | ||| || || | || ||| |
Sbjct 5752 CCTTGCACTCCGATGCCGATGGGGCGGTGGCGGAAGTTGGAATTTTGCGC-CTCGATGAC 5694
Query 213371 GGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATG 213430
|||||| ||||| ||||||||| ||| | ||| | | || ||| ||| |
Sbjct 5693 GGGGTAGTAGTTGACGTCGATGATGCGGTTCAAGTTAAACGCAACGACCTTGACGACCTC 5634
Query 213431 GGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAA-CTCAGGCAGGGCGA 213489
| ||| | | |||| |||| | |||| || | || ||| |||| ||||
Sbjct 5633 GTGCAGCTTTT------TGAAGTCGTACACGCCGTTCTTGATGAAGCTC-GGCAACGCGA 5581
Query 213490 TGCTGGCCAGGTTGCAAACGGCCACCTCCT-GAGAGTCTGTGTACTCCATGATCTCGGTG 213548
| |||| |||||| || || ||| | | ||| | | |||||| ||||||||||||
Sbjct 5580 TCGAAGCCAAGTTGCAGACAGCGCACTCGTCGGGAGCC-GAGTACTCGATGATCTCGGTG 5522
Query 213549 CACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAA 213608
|||||||| || ||| ||||| ||||||| ||||| |||||| ||| || |
Sbjct 5521 CACAGGTTCGACGATTTGATCGTGCCGAGGTTCTTTTGGTTCGACTTTTTGTTCGCGGCG 5462
Query 213609 TCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAG 213668
||||||||||||||| ||||| |||||||| | ||||| | | || ||| | |||
Sbjct 5461 TCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGACCTGGGCCTCGAGGATCGCGTACCAA 5402
Query 213669 AGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAG 213728
|| | || || | | || | || | | | ||||||| ||| |
Sbjct 5401 AGCTTTTGCGCGGGGATGGTCTTCTTGGC-GCGACCCTCCT--TTTCGTACTTCTCGAAC 5345
Query 213729 AGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATG 213788
|| || ||| || | ||| |||| || || || || ||||| || | |
Sbjct 5344 AGGACGCGGAACTCTTCGCCGTAGACTTCGTGGAGGCCGGGGGCCTCGGCGGGGCAGAAG 5285
Query 213789 AGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCG 213848
||| ||| || ||| | | ||| | || ||||||||| || |||| ||| |||||
Sbjct 5284 AGGGGCCACTCGCCGGCGGCCTCGACACGCTCCATGAACAGATCGGGGATCCAGAGCGCA 5225
Query 213849 GTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAG 213908
||| || || | | | || ||| || || ||||| || || || ||
Sbjct 5224 AAGAAGAGATCACGAGCGCGGACTTCTTCCTTGCCGTGATTCTTGCGAAGGTCCAGGAAC 5165
Query 213909 TCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTG 213965
|| |||| ||| |||||||||||||| | |||||| || ||||| || | || | |||
Sbjct 5164 TCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTG 5105
Query 213966 CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCG 214025
|| || ||||| || | || ||||| ||| |||||| | ||| || | ||
Sbjct 5104 CCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACGCGCAGCATGGGGACGATGCCA 5045
Query 214026 TTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAG 214085
|| || | ||||| || || || || || ||||||| || | | |||| |||
Sbjct 5044 TTCGAGTAGCCGTTCGTGCCGGCGATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTT 4985
Query 214086 AGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATG 214145
| || || ||||||||| ||||||||| | ||||| | | | || || ||||
Sbjct 4984 AAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAGATG 4925
Query 214146 CCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGAC 214205
|| | || ||| || | | | | ||||||||| ||||||||| || |
Sbjct 4924 CCTTCAATCGAGTCGTCCTTCATCGTGACCAAGAAGCACGACGAGAGCTGCGGGTGAGGG 4865
Query 214206 GAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTG 214265
| || | ||||| ||||| || ||| ||| | | | | || | ||| ||
Sbjct 4864 GTACCGGCATTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGGACATGAGGTTG 4805
Query 214266 TAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGC 214325
|||| || || ||| ||||||||| |||||| | ||| | ||| |||
Sbjct 4804 TAGGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACACGCATGAGC 4745
Query 214326 ATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGGCCCTTG---AGCAGGTAGGAGCGCTCC 214382
|||||||| || | || || | ||| | | || |||| ||||||||||||
Sbjct 4744 ATGTGCTGCGGACGTTC---GGCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCG 4688
Query 214383 AGAGTCTTGAACCCAAAGTAGGAGTAG 214409
|| |||||||| ||||| ||| ||||
Sbjct 4687 AGTGTCTTGAAGCCAAAATAGTTGTAG 4661
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931531367768320
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