Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12- 23] 123 sequences; 24,532,870 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq36 206 5e-48 >seq36 Length=1210608 Score = 206 bits (228), Expect = 5e-48 Identities = 789/1227 (64%), Gaps = 24/1227 (2%) Strand=Plus/Minus Query 213192 GCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTG 213251 |||| ||||| || | || | || |||| ||||||||| || || |||| | ||||| Sbjct 5872 GCCATGTCGCACGAAGACTCGATCGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTG 5813 Query 213252 AGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGC 213311 ||||| ||||| || || ||| |||||| || | |||| |||| || || Sbjct 5812 AGCTTGCGCGCCTCAGGCGAATCGAACGGCATCGCCAAGGCCATGAACGCATCGGCGAGA 5753 Query 213312 CCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAA 213370 || || || |||||||||||||| | ||| | | ||| || || | || ||| | Sbjct 5752 CCTTGCACTCCGATGCCGATGGGGCGGTGGCGGAAGTTGGAATTTTGCGC-CTCGATGAC 5694 Query 213371 GGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATG 213430 |||||| ||||| ||||||||| ||| | ||| | | || ||| ||| | Sbjct 5693 GGGGTAGTAGTTGACGTCGATGATGCGGTTCAAGTTAAACGCAACGACCTTGACGACCTC 5634 Query 213431 GGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAA-CTCAGGCAGGGCGA 213489 | ||| | | |||| |||| | |||| || | || ||| |||| |||| Sbjct 5633 GTGCAGCTTTT------TGAAGTCGTACACGCCGTTCTTGATGAAGCTC-GGCAACGCGA 5581 Query 213490 TGCTGGCCAGGTTGCAAACGGCCACCTCCT-GAGAGTCTGTGTACTCCATGATCTCGGTG 213548 | |||| |||||| || || ||| | | ||| | | |||||| |||||||||||| Sbjct 5580 TCGAAGCCAAGTTGCAGACAGCGCACTCGTCGGGAGCC-GAGTACTCGATGATCTCGGTG 5522 Query 213549 CACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAA 213608 |||||||| || ||| ||||| ||||||| ||||| |||||| ||| || | Sbjct 5521 CACAGGTTCGACGATTTGATCGTGCCGAGGTTCTTTTGGTTCGACTTTTTGTTCGCGGCG 5462 Query 213609 TCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAG 213668 ||||||||||||||| ||||| |||||||| | ||||| | | || ||| | ||| Sbjct 5461 TCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGACCTGGGCCTCGAGGATCGCGTACCAA 5402 Query 213669 AGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAG 213728 || | || || | | || | || | | | ||||||| ||| | Sbjct 5401 AGCTTTTGCGCGGGGATGGTCTTCTTGGC-GCGACCCTCCT--TTTCGTACTTCTCGAAC 5345 Query 213729 AGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATG 213788 || || ||| || | ||| |||| || || || || ||||| || | | Sbjct 5344 AGGACGCGGAACTCTTCGCCGTAGACTTCGTGGAGGCCGGGGGCCTCGGCGGGGCAGAAG 5285 Query 213789 AGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCG 213848 ||| ||| || ||| | | ||| | || ||||||||| || |||| ||| ||||| Sbjct 5284 AGGGGCCACTCGCCGGCGGCCTCGACACGCTCCATGAACAGATCGGGGATCCAGAGCGCA 5225 Query 213849 GTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAG 213908 ||| || || | | | || ||| || || ||||| || || || || Sbjct 5224 AAGAAGAGATCACGAGCGCGGACTTCTTCCTTGCCGTGATTCTTGCGAAGGTCCAGGAAC 5165 Query 213909 TCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTG 213965 || |||| ||| |||||||||||||| | |||||| || ||||| || | || | ||| Sbjct 5164 TCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTG 5105 Query 213966 CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCG 214025 || || ||||| || | || ||||| ||| |||||| | ||| || | || Sbjct 5104 CCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACGCGCAGCATGGGGACGATGCCA 5045 Query 214026 TTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAG 214085 || || | ||||| || || || || || ||||||| || | | |||| ||| Sbjct 5044 TTCGAGTAGCCGTTCGTGCCGGCGATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTT 4985 Query 214086 AGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATG 214145 | || || ||||||||| ||||||||| | ||||| | | | || || |||| Sbjct 4984 AAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAGATG 4925 Query 214146 CCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGAC 214205 || | || ||| || | | | | ||||||||| ||||||||| || | Sbjct 4924 CCTTCAATCGAGTCGTCCTTCATCGTGACCAAGAAGCACGACGAGAGCTGCGGGTGAGGG 4865 Query 214206 GAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTG 214265 | || | ||||| ||||| || ||| ||| | | | | || | ||| || Sbjct 4864 GTACCGGCATTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGGACATGAGGTTG 4805 Query 214266 TAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGC 214325 |||| || || ||| ||||||||| |||||| | ||| | ||| ||| Sbjct 4804 TAGGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACACGCATGAGC 4745 Query 214326 ATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGGCCCTTG---AGCAGGTAGGAGCGCTCC 214382 |||||||| || | || || | ||| | | || |||| |||||||||||| Sbjct 4744 ATGTGCTGCGGACGTTC---GGCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCG 4688 Query 214383 AGAGTCTTGAACCCAAAGTAGGAGTAG 214409 || |||||||| ||||| ||| |||| Sbjct 4687 AGTGTCTTGAAGCCAAAATAGTTGTAG 4661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931531367768320