Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12- 23] 123 sequences; 24,532,870 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq36 223 6e-53 >seq36 Length=1210608 Score = 223 bits (246), Expect = 6e-53 Identities = 788/1217 (65%), Gaps = 43/1217 (4%) Strand=Plus/Minus Query 221423 GCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG---GCCTCGGGAGAA 221479 || ||||||||||||||||| |||||| ||||||||| |||| ||||| || ||| Sbjct 5848 GCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAG---CTTGCGCGCCTCAGGCGAA 5792 Query 221480 GTGAAGGGCATACGC--AGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGA 221537 ||| ||||| ||| || |||| | | ||||| || || || |||||||| |||| Sbjct 5791 TCGAACGGCAT-CGCCAAGGCCATGAACG-CATCGGCGAGACCTTGCACTCCGATGCCGA 5734 Query 221538 TGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGA 221597 |||| | ||| | ||||||| ||| || ||||| || |||||||||||| Sbjct 5733 TGGGGCGGTGGCGGAAGTTGGAATTTTGCGCCTCGATGACGGGGTAGTAGTTGACGTCGA 5674 Query 221598 TCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGA 221657 | | ||| | ||| | | | ||| || || |||||| |||||| | ||| Sbjct 5673 TGATGCGGTTCAAGTTAAACGCAACGACCTTGACGACCTCGTGCAGCTTTT------TGA 5620 Query 221658 ACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCA 221717 | | || ||||| || || | | || ||| ||| | || |||| Sbjct 5619 AGTCGTACACGCCGT--TCTTGATGAAGCTCGGCAAC-GCGATCG----AA-----GCCA 5572 Query 221718 GGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGC 221777 ||| || || || |||||| | |||| |||||||| || || ||||| Sbjct 5571 AGTTGCAGACAGCGCACTCGTCGGGAGCCGAGTACTCGATGATCTCGGTGCACAGGTTCG 5512 Query 221778 TGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGA 221837 | ||||| || || |||| || || || ||||| || || ||||||||||||| Sbjct 5511 ACGATTTGATCGTGCCGAGGTTCTTTTGGTTCGACTTTTTGTTCGCGGCGTCCTTGTAGA 5452 Query 221838 GCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGG 221897 |||| ||||| ||| ||||| | ||| ||| | || ||| || ||| || | | | Sbjct 5451 GCATGAAGGGGTTGCCGGTCTCGACCTGGGCCTCGAGGATCGCGTACCAAAGCTTTTGCG 5392 Query 221898 CGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCA- 221956 || | ||| ||||| | |||||| |||||| ||| | | || || | | Sbjct 5391 CGGGGATGGTCTTCTTGGCGCGACCCTC---CTTTTCGTACT---TCTCGAACAGGACGC 5338 Query 221957 --AACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCC 222014 |||| ||| ||||| | |||| ||||| || | |||||| || | || || Sbjct 5337 GGAACTCTTCGCCGTAGACTTCGTGGAGGCCGGGGGCCTCGGCGGGGCAGAAGAGGGGCC 5278 Query 222015 AGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGA 222074 | | | | | | ||| | || |||||| || || |||||||| ||||| |||| Sbjct 5277 ACTCGCCGGCGGCCTCGACACGCTCCATGAACAGATCGGGGATCCAGAGCGCAAAGAAGA 5218 Query 222075 GATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAA 222134 |||| | | || || ||| ||||| || || | || |||| ||||| || | Sbjct 5217 GATCACGAGCGCGGACTTCTTCCTTGCCGTGATTCTTGCGAAGGTCCAGGAACTCGAAGA 5158 Query 222135 TGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCT 222194 ||| |||||||||||||| || |||| || | || ||||| |||||||||||||| | Sbjct 5157 CGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTT 5098 Query 222195 GATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATC 222254 | || || | | | |||| ||| ||| || | || || | || || || Sbjct 5097 GGTCGACGTAGCGCGCGGTGTTGTTGTAGACGCGCAGCATGGGGACGATGCCATTCGAGT 5038 Query 222255 GACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAG-ACATGCCG 222313 ||||| ||||| ||||| | ||| || | | ||| ||| | | ||| Sbjct 5037 AGCCGTTCGTGCCGGCGATGTAGGAGCCGGTCGCGCGGATGTT-GTGGATGCTTAAACCG 4979 Query 222314 ATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCC 222373 |||||||||||| || ||||| | ||||| ||||||| ||||| |||||| || Sbjct 4978 ATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAGATGCCTTCA 4919 Query 222374 ATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAG 222433 || ||||| ||||| | | | || || || ||||| | ||| | | | || || | Sbjct 4918 ATCGAGTCGTCCTTCATCGTGACCAAGAAGCACGACGAGAGCTGCGGGTGAGGGGTACCG 4859 Query 222434 GCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTC 222493 || || || ||||| || |||||| || ||||||| | ||||| || | ||| | | Sbjct 4858 GCATTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGGACATGAGGTTGTAGGAC 4799 Query 222494 TCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTAC 222553 | | ||| | |||||| || ||||| || | |||| | |||| ||||| | Sbjct 4798 TGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACACGCATGAGCATGTGC 4739 Query 222554 TGGGGCCTCTCCACAGGACCCT--TGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCT 222611 || || | || | |||| | | | || |||| ||| || || || |||| Sbjct 4738 TGCGGACGTTCGGC--GACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCGAGTGTCT 4681 Query 222612 TGAACCCAAAGTAGTTG 222628 |||| ||||| |||||| Sbjct 4680 TGAAGCCAAAATAGTTG 4664 Score = 95.1 bits (104), Expect = 2e-14 Identities = 156/224 (70%), Gaps = 7/224 (3%) Strand=Plus/Minus Query 25488 GTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTGGCCAAGGACAT 25547 |||||||||||| | || |||||||||||||||||| || || |||||||||| Sbjct 56486 GTACAAGAAGGCCGAGGCATCCTTCTGGACCGCCGAAGAGATGGACTTGTCCAAGGACAT 56427 Query 25548 GGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTACGTGTTG 25602 | ||| |||| || |||| | || ||||||| | || || | |||| | Sbjct 56426 GCACGACTGGGACAACAAGCTCAAGCC--CGACGAGCGCTACTTCATCTCGCACGTCCTC 56369 Query 25603 GCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTCACCAGG 25662 || ||||| || || || || || || || |||||||| || |||| | ||| || | Sbjct 56368 GCCTTCTTCGCCGCGTCCGACGGCATCGTCAACGAGAACTTGGTCGAGCGGTTCTCCGGT 56309 Query 25663 GAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 || || |||| || || || || |||||||||||||| || Sbjct 56308 GAGGTCCAGTCCGCCGAAGCTCGATGCTTCTACGGTTTCCAAAT 56265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928843371901120