Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12-
23] 123 sequences; 24,532,870 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq36 223 6e-53
>seq36
Length=1210608
Score = 223 bits (246), Expect = 6e-53
Identities = 788/1217 (65%), Gaps = 43/1217 (4%)
Strand=Plus/Minus
Query 221423 GCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG---GCCTCGGGAGAA 221479
|| ||||||||||||||||| |||||| ||||||||| |||| ||||| || |||
Sbjct 5848 GCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAG---CTTGCGCGCCTCAGGCGAA 5792
Query 221480 GTGAAGGGCATACGC--AGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGA 221537
||| ||||| ||| || |||| | | ||||| || || || |||||||| ||||
Sbjct 5791 TCGAACGGCAT-CGCCAAGGCCATGAACG-CATCGGCGAGACCTTGCACTCCGATGCCGA 5734
Query 221538 TGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGA 221597
|||| | ||| | ||||||| ||| || ||||| || ||||||||||||
Sbjct 5733 TGGGGCGGTGGCGGAAGTTGGAATTTTGCGCCTCGATGACGGGGTAGTAGTTGACGTCGA 5674
Query 221598 TCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGA 221657
| | ||| | ||| | | | ||| || || |||||| |||||| | |||
Sbjct 5673 TGATGCGGTTCAAGTTAAACGCAACGACCTTGACGACCTCGTGCAGCTTTT------TGA 5620
Query 221658 ACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCA 221717
| | || ||||| || || | | || ||| ||| | || ||||
Sbjct 5619 AGTCGTACACGCCGT--TCTTGATGAAGCTCGGCAAC-GCGATCG----AA-----GCCA 5572
Query 221718 GGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGC 221777
||| || || || |||||| | |||| |||||||| || || |||||
Sbjct 5571 AGTTGCAGACAGCGCACTCGTCGGGAGCCGAGTACTCGATGATCTCGGTGCACAGGTTCG 5512
Query 221778 TGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGA 221837
| ||||| || || |||| || || || ||||| || || |||||||||||||
Sbjct 5511 ACGATTTGATCGTGCCGAGGTTCTTTTGGTTCGACTTTTTGTTCGCGGCGTCCTTGTAGA 5452
Query 221838 GCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGG 221897
|||| ||||| ||| ||||| | ||| ||| | || ||| || ||| || | | |
Sbjct 5451 GCATGAAGGGGTTGCCGGTCTCGACCTGGGCCTCGAGGATCGCGTACCAAAGCTTTTGCG 5392
Query 221898 CGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCA- 221956
|| | ||| ||||| | |||||| |||||| ||| | | || || | |
Sbjct 5391 CGGGGATGGTCTTCTTGGCGCGACCCTC---CTTTTCGTACT---TCTCGAACAGGACGC 5338
Query 221957 --AACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCC 222014
|||| ||| ||||| | |||| ||||| || | |||||| || | || ||
Sbjct 5337 GGAACTCTTCGCCGTAGACTTCGTGGAGGCCGGGGGCCTCGGCGGGGCAGAAGAGGGGCC 5278
Query 222015 AGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGA 222074
| | | | | | ||| | || |||||| || || |||||||| ||||| ||||
Sbjct 5277 ACTCGCCGGCGGCCTCGACACGCTCCATGAACAGATCGGGGATCCAGAGCGCAAAGAAGA 5218
Query 222075 GATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAA 222134
|||| | | || || ||| ||||| || || | || |||| ||||| || |
Sbjct 5217 GATCACGAGCGCGGACTTCTTCCTTGCCGTGATTCTTGCGAAGGTCCAGGAACTCGAAGA 5158
Query 222135 TGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCT 222194
||| |||||||||||||| || |||| || | || ||||| |||||||||||||| |
Sbjct 5157 CGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTT 5098
Query 222195 GATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATC 222254
| || || | | | |||| ||| ||| || | || || | || || ||
Sbjct 5097 GGTCGACGTAGCGCGCGGTGTTGTTGTAGACGCGCAGCATGGGGACGATGCCATTCGAGT 5038
Query 222255 GACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAG-ACATGCCG 222313
||||| ||||| ||||| | ||| || | | ||| ||| | | |||
Sbjct 5037 AGCCGTTCGTGCCGGCGATGTAGGAGCCGGTCGCGCGGATGTT-GTGGATGCTTAAACCG 4979
Query 222314 ATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCC 222373
|||||||||||| || ||||| | ||||| ||||||| ||||| |||||| ||
Sbjct 4978 ATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAGATGCCTTCA 4919
Query 222374 ATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAG 222433
|| ||||| ||||| | | | || || || ||||| | ||| | | | || || |
Sbjct 4918 ATCGAGTCGTCCTTCATCGTGACCAAGAAGCACGACGAGAGCTGCGGGTGAGGGGTACCG 4859
Query 222434 GCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTC 222493
|| || || ||||| || |||||| || ||||||| | ||||| || | ||| | |
Sbjct 4858 GCATTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGGACATGAGGTTGTAGGAC 4799
Query 222494 TCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTAC 222553
| | ||| | |||||| || ||||| || | |||| | |||| ||||| |
Sbjct 4798 TGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACACGCATGAGCATGTGC 4739
Query 222554 TGGGGCCTCTCCACAGGACCCT--TGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCT 222611
|| || | || | |||| | | | || |||| ||| || || || ||||
Sbjct 4738 TGCGGACGTTCGGC--GACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCGAGTGTCT 4681
Query 222612 TGAACCCAAAGTAGTTG 222628
|||| ||||| ||||||
Sbjct 4680 TGAAGCCAAAATAGTTG 4664
Score = 95.1 bits (104), Expect = 2e-14
Identities = 156/224 (70%), Gaps = 7/224 (3%)
Strand=Plus/Minus
Query 25488 GTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTGGCCAAGGACAT 25547
|||||||||||| | || |||||||||||||||||| || || ||||||||||
Sbjct 56486 GTACAAGAAGGCCGAGGCATCCTTCTGGACCGCCGAAGAGATGGACTTGTCCAAGGACAT 56427
Query 25548 GGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTACGTGTTG 25602
| ||| |||| || |||| | || ||||||| | || || | |||| |
Sbjct 56426 GCACGACTGGGACAACAAGCTCAAGCC--CGACGAGCGCTACTTCATCTCGCACGTCCTC 56369
Query 25603 GCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTCACCAGG 25662
|| ||||| || || || || || || || |||||||| || |||| | ||| || |
Sbjct 56368 GCCTTCTTCGCCGCGTCCGACGGCATCGTCAACGAGAACTTGGTCGAGCGGTTCTCCGGT 56309
Query 25663 GAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706
|| || |||| || || || || |||||||||||||| ||
Sbjct 56308 GAGGTCCAGTCCGCCGAAGCTCGATGCTTCTACGGTTTCCAAAT 56265
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928843371901120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |