Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12- 23] 123 sequences; 24,532,870 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq55 143 4e-29 >seq55 Length=958678 Score = 143 bits (158), Expect = 4e-29 Identities = 260/379 (69%), Gaps = 1/379 (0%) Strand=Plus/Plus Query 47788 CCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCG 47847 || || || | |||||| || || || | | || | |||||||| | |||||| ||||| Sbjct 913868 CCCGTCGCGAGAACAAAGTCGTCGGGGTGTCCT-GCTGAAGCATCATCCACATGCCCTCG 913926 Query 47848 ACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAG 47907 ||||| || | ||||||||||| ||||| || || | || || || || | ||| Sbjct 913927 ACATAGTCGCGCGCATGTCCCCAATCACGCTTGGCCTCCATGTTGCCGAGGTAGAGGCAG 913986 Query 47908 TCTTGCTTACCTTCAGAGATTGCTTTTAATGCTCTTGTAATCTTACGAGTTACAAAAGTT 47967 || || | ||| ||||| | | |||| | |||||| | || || || || Sbjct 913987 TCCTGTTGACCGAGTGAGATCTCGGCGACAGCTCGCGAAATCTTCCTCGTGACGAAGGTG 914046 Query 47968 TCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTAT 48027 |||||| | ||| || || || || || || |||||| | || || ||||| ||||| Sbjct 914047 CGACCACGACGTGGGGACTCGTGGTTGAAGAGGATACCATTGCACGCGTACATGTCGTAT 914106 Query 48028 GATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAA 48087 || || || |||||||| || |||||| | | || | || || || || ||||| ||| Sbjct 914107 GACTCGCGGTAGTTCTTGACGATCCAGAAGGCGTACAACTTGGCGACTCCGTAAGGCGAA 914166 Query 48088 CGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCA 48147 || || ||||| || || || || | || || ||||| ||||| || || || || Sbjct 914167 CGAGGGTAGAAGGGCGTCGTTTCGGATTGAGGGGTCTCGACGACCTTGCCGTACAGCTCG 914226 Query 48148 CTGGTGGATGCTTGATAGA 48166 ||| || ||||| |||| Sbjct 914227 GAGGTCGAGGCTTGGTAGA 914245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665493376802360