Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12-
23] 123 sequences; 24,532,870 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq36 188 9e-43
seq55 127 2e-24
seq44 105 8e-18
>seq36
Length=1210608
Score = 188 bits (208), Expect = 9e-43
Identities = 560/857 (65%), Gaps = 15/857 (2%)
Strand=Plus/Plus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|| ||| ||||| ||||||| ||||| ||||||||||||| | ||||| || |||
Sbjct 4734 CCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGACATCGAGCGCGTC 4793
Query 75272 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 75331
||| || | ||| || |||||| | | |||| ||||| | || || ||||||
Sbjct 4794 TTGCAGTCCTACAACCTCATGTCCGAGCGCTACTTCACCCACGCCTCGCCGACGCTCTTC 4853
Query 75332 AATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 75391
||||| ||||| || |||||| | || |||||| | || | | ||||| |||
Sbjct 4854 AATGCCGGTACCCCTCACCCGCAGCTCTCGTCGTGCTTCTTGGTCACGATGAAGGACGAC 4913
Query 75392 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 75451
|| || | || ||||| | || || | | ||| |||| ||||| ||| || ||
Sbjct 4914 TCGATTGAAGGCATCTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAGACCGCCGGT 4973
Query 75452 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-ACAA 75509
||||| || | |||||| | | | || | ||| || ||| || || |
Sbjct 4974 GGTATCGGTTTAAGCATCCACAACATCCGCGCGACCGG--CTCCTACATCGCCGGCACGA 5031
Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569
| || | || |||| || | || ||||| ||||| | ||| ||| |||||||| |
Sbjct 5032 ACGGCTACTCGAATGGCATCGTCCCCATGCTGCGCGTCTACAACAACACCGCGCGCTACG 5091
Query 75570 TAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGC 75623
| | |||| || ||||| | || || ||||| ||||| | || || ||||
Sbjct 5092 TCGACCAAGGTGGCAACAAGCGTCCC---GGAGCCTTCGCGATCTACCTCGAGCCGTGGC 5148
Query 75624 ATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGT 75683
| ||||| || | |||||||| || | || || || || | ||||| | ||
Sbjct 5149 ACGCCGACGTCTTCGAGTTCCTGGACCTTCGCAAGAATCACGGCAAGGAAGAAGTCCGCG 5208
Query 75684 GTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGG 75743
| | |||||||| | | || ||||| || || || |||||| |||| || |||| |
Sbjct 5209 CTCGTGATCTCTTCTTTGCGCTCTGGATCCCCGATCTGTTCATGGAGCGTGTCGAGGCCG 5268
Query 75744 GTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTG 75803
|| | ||| | || ||||| || | | |||| || || ||| ||| | || |
Sbjct 5269 CCGGCGAGTGGCCCCTCTTCTGCCCCGCCGAGGCCCCCGGCCTCCACGAAGTCTACGGCG 5328
Query 75804 AGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTAC 75863
| ||||| | ||| | | ||||| ||| |||||||| | ||||| ||| | |
Sbjct 5329 AAGAGTTCCGCGTCCTGTTCGAGAAGTACGAAAAGGAGGGTCGCGCCAAGAAGACCATCC 5388
Query 75864 CAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATAT 75922
| || || | | ||||| | || || ||| | | ||| ||||| || | || |
Sbjct 5389 CCGC-GCAAAAGCTTTGGTACGCGATCCTCGAGGCCCAGGTCGAGACCGGCAACCCCTTC 5447
Query 75923 ATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAG 75982
||||| |||||||| || ||||| ||| ||||||||||| | || || |||||
Sbjct 5448 ATGCTCTACAAGGACGCCGCGAACAAAAAGTCGAACCAAAAGAACCTCGGCACGATCAAA 5507
Query 75983 AGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGC 76042
|| || || ||||| || || | |||||| | | | || ||| ||||| |||
Sbjct 5508 TCGTCGAACCTGTGCACCGAGATCATCGAGTACTCGGCTCCCGACGAGTGCGCTGTCTGC 5567
Query 76043 AATTTGGCATCAATCGC 76059
|| ||||| || |||||
Sbjct 5568 AACTTGGCTTCGATCGC 5584
>seq55
Length=958678
Score = 127 bits (140), Expect = 2e-24
Identities = 273/407 (67%), Gaps = 1/407 (0%)
Strand=Plus/Plus
Query 177559 TCAACAAACTGCCTCACAGAGTGTGTCTCCCCCGTCGCGACAACATATTCATCAGCCTCT 177618
|| || |||| | | || | ||| ||||| |||||||||| |||| | || || | | |
Sbjct 913838 TCGACGAACTCCTTGACGGGGTGGGTCTCACCCGTCGCGAGAACAAAGTCGTCGGGGTGT 913897
Query 177619 TCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTCTG 177678
|| | |||||||| | ||||||| | || |||||||| ||||| ||||| || |
Sbjct 913898 CCT-GCTGAAGCATCATCCACATGCCCTCGACATAGTCGCGCGCATGTCCCCAATCACGC 913956
Query 177679 GCAGCGTTGAGGTTACCGAGTTCAAGGAACTCTCTCTCACCTTTCACAATTTGTTTGACG 177738
|| | | ||| ||||| | ||| | || | ||| || | |||
Sbjct 913957 TTGGCCTCCATGTTGCCGAGGTAGAGGCAGTCCTGTTGACCGAGTGAGATCTCGGCGACA 914016
Query 177739 CCATCAGTAATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAG 177798
| | ||||||| | ||||| ||| | ||| || | || || ||||||||||||
Sbjct 914017 GCTCGCGAAATCTTCCTCGTGACGAAGGTGCGACCACGACGTGGGGACTCGTGGTTGAAG 914076
Query 177799 AGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGA 177858
||||| || ||| || ||||| | || || || ||||| || ||||||| ||||
Sbjct 914077 AGGATACCATTGCACGCGTACATGTCGTATGACTCGCGGTAGTTCTTGACGATCCAGAAG 914136
Query 177859 GCGGCCAATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGT 177918
||| ||| |||| ||| || || || || ||||||||||| ||| || | |||
Sbjct 914137 GCGTACAACTTGGCGACTCCGTAAGGCGAACGAGGGTAGAAGGGCGTCGTTTCGGATTGA 914196
Query 177919 GGAGTTTCTCGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965
|| || || ||| || || ||| ||| || || |||||||||||
Sbjct 914197 GGGGTCTCGACGACCTTGCCGTACAGCTCGGAGGTCGAGGCTTGGTA 914243
>seq44
Length=493270
Score = 105 bits (116), Expect = 8e-18
Identities = 155/218 (71%), Gaps = 1/218 (0%)
Strand=Plus/Plus
Query 177748 ATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATTCCG 177807
|| ||| | ||||| ||| | ||| || | || || ||||||||||||||||| |||
Sbjct 207249 ATTTTCCTCGTGACGAAGGTGCGACCACGGCGGGG-GACTCGTGGTTGAAGAGGATACCG 207307
Query 177808 GAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGAGCGGCCAAT 177867
||| || |||| | || || || ||||| || ||||||| |||| ||| |||
Sbjct 207308 TTGCACGCGAACATGTCGTACGACTCGCGGTAGTTCTTGACGATCCAGAAGGCGTACAAC 207367
Query 177868 TTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGTGGAGTTTCT 177927
|||| ||| || ||| || || ||||||||||| ||| ||| | || || || ||
Sbjct 207368 TTGGCGACTCCGTAGGGCGAGCGAGGGTAGAAGGGGGTCGTCTCGGACTGAGGGGTCTCG 207427
Query 177928 CGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965
||| || || ||| |||||| || ||||| |||||
Sbjct 207428 ACGACCTTGCCGTACAACTCCGACGTCGAGGCCTGGTA 207465
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596568682774240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |