Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12- 23] 123 sequences; 24,532,870 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq36 188 9e-43 seq55 127 2e-24 seq44 105 8e-18 >seq36 Length=1210608 Score = 188 bits (208), Expect = 9e-43 Identities = 560/857 (65%), Gaps = 15/857 (2%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| ||||||| ||||| ||||||||||||| | ||||| || ||| Sbjct 4734 CCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGACATCGAGCGCGTC 4793 Query 75272 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 75331 ||| || | ||| || |||||| | | |||| ||||| | || || |||||| Sbjct 4794 TTGCAGTCCTACAACCTCATGTCCGAGCGCTACTTCACCCACGCCTCGCCGACGCTCTTC 4853 Query 75332 AATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 75391 ||||| ||||| || |||||| | || |||||| | || | | ||||| ||| Sbjct 4854 AATGCCGGTACCCCTCACCCGCAGCTCTCGTCGTGCTTCTTGGTCACGATGAAGGACGAC 4913 Query 75392 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 75451 || || | || ||||| | || || | | ||| |||| ||||| ||| || || Sbjct 4914 TCGATTGAAGGCATCTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAGACCGCCGGT 4973 Query 75452 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-ACAA 75509 ||||| || | |||||| | | | || | ||| || ||| || || | Sbjct 4974 GGTATCGGTTTAAGCATCCACAACATCCGCGCGACCGG--CTCCTACATCGCCGGCACGA 5031 Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569 | || | || |||| || | || ||||| ||||| | ||| ||| |||||||| | Sbjct 5032 ACGGCTACTCGAATGGCATCGTCCCCATGCTGCGCGTCTACAACAACACCGCGCGCTACG 5091 Query 75570 TAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGC 75623 | | |||| || ||||| | || || ||||| ||||| | || || |||| Sbjct 5092 TCGACCAAGGTGGCAACAAGCGTCCC---GGAGCCTTCGCGATCTACCTCGAGCCGTGGC 5148 Query 75624 ATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGT 75683 | ||||| || | |||||||| || | || || || || | ||||| | || Sbjct 5149 ACGCCGACGTCTTCGAGTTCCTGGACCTTCGCAAGAATCACGGCAAGGAAGAAGTCCGCG 5208 Query 75684 GTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGG 75743 | | |||||||| | | || ||||| || || || |||||| |||| || |||| | Sbjct 5209 CTCGTGATCTCTTCTTTGCGCTCTGGATCCCCGATCTGTTCATGGAGCGTGTCGAGGCCG 5268 Query 75744 GTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTG 75803 || | ||| | || ||||| || | | |||| || || ||| ||| | || | Sbjct 5269 CCGGCGAGTGGCCCCTCTTCTGCCCCGCCGAGGCCCCCGGCCTCCACGAAGTCTACGGCG 5328 Query 75804 AGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTAC 75863 | ||||| | ||| | | ||||| ||| |||||||| | ||||| ||| | | Sbjct 5329 AAGAGTTCCGCGTCCTGTTCGAGAAGTACGAAAAGGAGGGTCGCGCCAAGAAGACCATCC 5388 Query 75864 CAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATAT 75922 | || || | | ||||| | || || ||| | | ||| ||||| || | || | Sbjct 5389 CCGC-GCAAAAGCTTTGGTACGCGATCCTCGAGGCCCAGGTCGAGACCGGCAACCCCTTC 5447 Query 75923 ATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAG 75982 ||||| |||||||| || ||||| ||| ||||||||||| | || || ||||| Sbjct 5448 ATGCTCTACAAGGACGCCGCGAACAAAAAGTCGAACCAAAAGAACCTCGGCACGATCAAA 5507 Query 75983 AGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGC 76042 || || || ||||| || || | |||||| | | | || ||| ||||| ||| Sbjct 5508 TCGTCGAACCTGTGCACCGAGATCATCGAGTACTCGGCTCCCGACGAGTGCGCTGTCTGC 5567 Query 76043 AATTTGGCATCAATCGC 76059 || ||||| || ||||| Sbjct 5568 AACTTGGCTTCGATCGC 5584 >seq55 Length=958678 Score = 127 bits (140), Expect = 2e-24 Identities = 273/407 (67%), Gaps = 1/407 (0%) Strand=Plus/Plus Query 177559 TCAACAAACTGCCTCACAGAGTGTGTCTCCCCCGTCGCGACAACATATTCATCAGCCTCT 177618 || || |||| | | || | ||| ||||| |||||||||| |||| | || || | | | Sbjct 913838 TCGACGAACTCCTTGACGGGGTGGGTCTCACCCGTCGCGAGAACAAAGTCGTCGGGGTGT 913897 Query 177619 TCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTCTG 177678 || | |||||||| | ||||||| | || |||||||| ||||| ||||| || | Sbjct 913898 CCT-GCTGAAGCATCATCCACATGCCCTCGACATAGTCGCGCGCATGTCCCCAATCACGC 913956 Query 177679 GCAGCGTTGAGGTTACCGAGTTCAAGGAACTCTCTCTCACCTTTCACAATTTGTTTGACG 177738 || | | ||| ||||| | ||| | || | ||| || | ||| Sbjct 913957 TTGGCCTCCATGTTGCCGAGGTAGAGGCAGTCCTGTTGACCGAGTGAGATCTCGGCGACA 914016 Query 177739 CCATCAGTAATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAG 177798 | | ||||||| | ||||| ||| | ||| || | || || |||||||||||| Sbjct 914017 GCTCGCGAAATCTTCCTCGTGACGAAGGTGCGACCACGACGTGGGGACTCGTGGTTGAAG 914076 Query 177799 AGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGA 177858 ||||| || ||| || ||||| | || || || ||||| || ||||||| |||| Sbjct 914077 AGGATACCATTGCACGCGTACATGTCGTATGACTCGCGGTAGTTCTTGACGATCCAGAAG 914136 Query 177859 GCGGCCAATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGT 177918 ||| ||| |||| ||| || || || || ||||||||||| ||| || | ||| Sbjct 914137 GCGTACAACTTGGCGACTCCGTAAGGCGAACGAGGGTAGAAGGGCGTCGTTTCGGATTGA 914196 Query 177919 GGAGTTTCTCGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 || || || ||| || || ||| ||| || || ||||||||||| Sbjct 914197 GGGGTCTCGACGACCTTGCCGTACAGCTCGGAGGTCGAGGCTTGGTA 914243 >seq44 Length=493270 Score = 105 bits (116), Expect = 8e-18 Identities = 155/218 (71%), Gaps = 1/218 (0%) Strand=Plus/Plus Query 177748 ATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATTCCG 177807 || ||| | ||||| ||| | ||| || | || || ||||||||||||||||| ||| Sbjct 207249 ATTTTCCTCGTGACGAAGGTGCGACCACGGCGGGG-GACTCGTGGTTGAAGAGGATACCG 207307 Query 177808 GAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGAGCGGCCAAT 177867 ||| || |||| | || || || ||||| || ||||||| |||| ||| ||| Sbjct 207308 TTGCACGCGAACATGTCGTACGACTCGCGGTAGTTCTTGACGATCCAGAAGGCGTACAAC 207367 Query 177868 TTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGTGGAGTTTCT 177927 |||| ||| || ||| || || ||||||||||| ||| ||| | || || || || Sbjct 207368 TTGGCGACTCCGTAGGGCGAGCGAGGGTAGAAGGGGGTCGTCTCGGACTGAGGGGTCTCG 207427 Query 177928 CGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 ||| || || ||| |||||| || ||||| ||||| Sbjct 207428 ACGACCTTGCCGTACAACTCCGACGTCGAGGCCTGGTA 207465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568682774240