Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12- 23] 123 sequences; 24,532,870 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq79 107 6e-18 >seq79 Length=1842920 Score = 107 bits (118), Expect = 6e-18 Identities = 130/177 (73%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 251475 GAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACC 251534 ||||| || ||||||| || ||||| ||||||||||||||||| |||||||||||||| Sbjct 1126946 GAAGCCAGCGACACCGTGAGAGATCATGCAATCACGCTCCATTTCTCCGAAACGAAGACC 1127005 Query 251535 ACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGA 251594 |||||| |||| | |||||| | || || || || | | | | ||||||| | Sbjct 1127006 ACCATCTCGAGATCGACCCTCCACGGGTTGTCGGGTCAAAATCTGAAGAGGACCGCGAGC 1127065 Query 251595 GCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACC 251651 || || || || || ||||| ||||||||||| |||||| ||| ||||| Sbjct 1127066 ACGAGAGTGAATTTTGTCGTTGACCATGTGCTTGAGACGTTGGTAGTATGTTGGACC 1127122 Score = 87.8 bits (96), Expect = 5e-12 Identities = 109/149 (73%), Gaps = 8/149 (5%) Strand=Plus/Plus Query 233274 CACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATTTG 233333 ||||||||| ||||| |||||||| |||||||| || | ||| ||||||||||| | Sbjct 1126957 CACCGTGAGAGATCATGCAATCACGCTCCATTTCTCCGAAACGAAGACCACCATCTCGAG 1127016 Query 233334 ACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCT----TGGACCCTGAGCACGATAA 233389 | | ||||| || | ||| || || |||| ||| ||||| |||||||| | Sbjct 1127017 ATCGACCCTCCACGGGTTGTCGGGTCAAAA----TCTGAAGAGGACCGCGAGCACGAGAG 1127072 Query 233390 TTAATTTTATCTTTAACCATATGCTTCAG 233418 | |||||| || || ||||| ||||| || Sbjct 1127073 TGAATTTTGTCGTTGACCATGTGCTTGAG 1127101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471815280507451