Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12-
23] 123 sequences; 24,532,870 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq36 250 3e-60
seq21 109 7e-18
seq97 105 8e-17
seq79 96.9 4e-14
>seq36
Length=1210608
Score = 250 bits (276), Expect = 3e-60
Identities = 352/491 (72%), Gaps = 19/491 (4%)
Strand=Plus/Minus
Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125
||||||||||||||||| |||| ||| ||||||| |||||||| |||| ||| || ||
Sbjct 5098 TGGTCGACGTAGCGCGCGGTGTTGTTGTAGACGCGCAGCATGGGGACGATGCCATTCGAG 5039
Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185
| |||||| ||||| || | ||||| ||||| ||||| | ||||| | || |||
Sbjct 5038 TAGCCGTTCGTGCCGGCGATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTTAAACCG 4979
Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245
|| || ||||| | ||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 4978 ATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAGATGCCTTCA 4919
Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305
||||||||| ||||||| || | |||||||||||| |||||||| | || |||
Sbjct 4918 ATCGAGTCGTCCTTCATCGTGACCAAGAAGCACGACGAGAGCTGCGGGTGAGGGGTACCG 4859
Query 1630306 GCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGG-T 1630364
|| ||||||||||| |||| || |||||| | || |||||| || |||||
Sbjct 4858 GCATTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGGACATGAGGTTGTAGGAC 4799
Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424
|| || |||||| || | |||| | || | | ||||| ||||||
Sbjct 4798 TGCAAG-ACGCGC------------TCGATGTCGTGA---CCGTGGATGCCGACGGCGAC 4755
Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCG-CGCACCTTGGTCAGGTAGG 1630483
||||||||||||| ||| || || ||| |||| |||| || | | || |||||
Sbjct 4754 ACGCATGAGCATGTGCTGCGGACGTTCGGCGACCTTGCCGTCGATGCGAAG-CAAGTAGG 4696
Query 1630484 ACCGGCGCATGGTCATGAGGCCAAAGTAGGAAAAGGCAAAATCGCGGTCGTGGCGGATGG 1630543
| || | ||| ||| |||||| ||| || | ||||||||||||| | || ||
Sbjct 4695 AGCGCTCGAGTGTCTTGAAGCCAAAATAGTTGTAGCCGAAATCGCGGTCGTAGATGACGG 4636
Query 1630544 CGGCGTCGAGG 1630554
|| || ||||
Sbjct 4635 CGCTGTTGAGG 4625
Score = 145 bits (160), Expect = 9e-29
Identities = 297/450 (66%), Gaps = 0/450 (0%)
Strand=Plus/Minus
Query 1628151 GGGCGACGAAAACTGGACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTT 1628210
||| | ||| ||| || |||||||||||||||||| | ||| | |||| || |||||
Sbjct 5549 GGGAGCCGAGTACTCGATGATCTCGGTGCACAGGTTCGACGATTTGATCGTGCCGAGGTT 5490
Query 1628211 CTGCTGGTTGGTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTC 1628270
|| ||||| | | ||| |||||||||||| ||||||| |||| |||||||||
Sbjct 5489 CTTTTGGTTCGACTTTTTGTTCGCGGCGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTC 5430
Query 1628271 GATCTGCGCCGCGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCGCGCGCG 1628330
|| ||| ||| ||| ||| || |||| | || ||||||| | | || |||||
Sbjct 5429 GACCTGGGCCTCGAGGATCGCGTACCAAAGCTTTTGCGCGGGGATGGTCTTCTTGGCGCG 5370
Query 1628331 GCCCTNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAG 1628390
|||| || | |||||||| ||||| ||
Sbjct 5369 ACCCTCCTTTTCGTACTTCTCGAACAGGACGCGGAACTCTTCGCCGTAGACTTCGTGGAG 5310
Query 1628391 GCCGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCAT 1628450
|||||| ||||||| || || ||||| | ||| ||||| ||| | | | || |||
Sbjct 5309 GCCGGGGGCCTCGGCGGGGCAGAAGAGGGGCCACTCGCCGGCGGCCTCGACACGCTCCAT 5250
Query 1628451 AAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCC 1628510
|| || || |||| || || | ||||| || || || ||| || ||||||||
Sbjct 5249 GAACAGATCGGGGATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACTTCTTCCTTGCC 5190
Query 1628511 GTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCA 1628570
||| ||||| ||||| || | |||| | |||||||||||||||||| ||||||
Sbjct 5189 GTGATTCTTGCGAAGGTCCAGGAACTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGAT 5130
Query 1628571 GGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600
|| ||||| || |||||| ||| ||
Sbjct 5129 CGCGAAGGCTCCGGGACGCTTGTTGCCACC 5100
Score = 96.9 bits (106), Expect = 4e-14
Identities = 168/242 (69%), Gaps = 2/242 (1%)
Strand=Plus/Minus
Query 1626981 CTGGTCGACGGTAAACTGGATGGCGTCGGCGGCGGGCCTGGTGCGCAGATAGTACATGCC 1627040
||||||||||||||||| ||| || || |||||| | ||||||| |||||||||||
Sbjct 6706 CTGGTCGACGGTAAACTTGATCGCACCGACGGCGGCGCGCGTGCGCAAGTAGTACATGCC 6647
Query 1627041 GGTCTTGAGGCCGCGGCGCCACGCGTAGGCGTGCATCGACGTGATGCGCTCGGGCGTCGC 1627100
||||| | || || ||| |||| ||||||||||||| || | |||||
Sbjct 6646 CGTCTTCAATCCTCGCTTCCAGCCGTAAAAATGCATCGACGTGAGCTGCGCCATCGTCGG 6587
Query 1627101 G-TCGGCGCAGTACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATCGGCCG 1627159
| ||| | | | | |||||| || || |||||||| | | | || ||||| |
Sbjct 6586 GCTCGAC-AAATGGATGTTGAGTGATTGCGACTGGTCGATGAATGCACCCCGGTCGGCGG 6528
Query 1627160 CCATGTCGATGGTGACCCGGTTGGGCACCTCCCACACGGTCTTGAAGATGGCCTTGAGGT 1627219
|| |||||| || | | | | ||||| ||||||||| ||||||||||||| |
Sbjct 6527 ACAGATCGATGATGGTCTTTTGCGAGAGTTCCCAGACGGTCTTGTAGATGGCCTTGAGAT 6468
Query 1627220 CG 1627221
||
Sbjct 6467 CG 6466
>seq21
Length=1587489
Score = 109 bits (120), Expect = 7e-18
Identities = 163/231 (71%), Gaps = 3/231 (1%)
Strand=Plus/Plus
Query 869653 GATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGGACCTCCTTCATGAACCGGCC 869712
|||||| ||||| |||||| |||| ||||||| | || ||||| || ||||| |
Sbjct 346837 GATCTGAAAGCCATAAAAGCACCTCGCCTCTGCGAACTGCACCTCACTCGAGAACCTCTC 346896
Query 869713 GGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAAAAAGCCAGGACGTGCTTGAT 869772
| ||| ||||| ||||| |||||| ||||||||||| || || || || |||
Sbjct 346897 GACCAAATTCTCATTCACGACGCCGTCCGAAGCGGCGAAAAAGGCGAGTACATGGGCGAT 346956
Query 869773 AAAGTGGCGCTCGTCGTCGCTGAGC---GACACCCAGTGGACGGTGTCGGCGCTGAGGTC 869829
|||| ||| ||||||| | ||||| ||||| | | |||| || ||||||
Sbjct 346957 GAAGTAGCGTTCGTCGTTGTTGAGCTTGTGGTGCCAGTCGTGGAGGTCGTTGCCGAGGTC 347016
Query 869830 CACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTACATCTCCCA 869880
| ||| ||||||| ||| | || |||| ||| | ||||||||| ||||
Sbjct 347017 GATCTCTTCGGCGGACCAAAAGGACGCCTGGGCTTGTTTGTACATGGCCCA 347067
>seq97
Length=1700547
Score = 105 bits (116), Expect = 8e-17
Identities = 146/203 (72%), Gaps = 6/203 (3%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||| ||| || ||| | | ||||| || |||| ||||||||||||||||| ||
Sbjct 1079499 GCTTGGACAGCTCTCCGGGGAGGATCAATCGGACGGAGGTCTGGATCTCGCGCGACGAGA 1079440
Query 1254403 TCGTG---TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGA 1254459
| || ||||| |||| || ||| || | |||||| | ||| ||| || |
Sbjct 1079439 TGGTCGACTTGCGGTTGTAGGA---CGCGAGCTTGGACGCCTCGCCGGCGAGGCGCTCAA 1079383
Query 1254460 TCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGG 1254519
||||||||||| |||||||| | || ||||| |||||| ||||| || |||||
Sbjct 1079382 AGATGTCGTTGACGAACGAGTTGAGGATGAGCATCGCCTTGTTCGAGATACCGGTGTCGG 1079323
Query 1254520 GGTGCACCTGCTTGAGCACCTTG 1254542
|||| |||||||| | |||||||
Sbjct 1079322 GGTGAACCTGCTTCAACACCTTG 1079300
Score = 105 bits (116), Expect = 8e-17
Identities = 146/203 (72%), Gaps = 6/203 (3%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||| ||| || ||| | | ||||| || |||| ||||||||||||||||| ||
Sbjct 1125485 GCTTGGACAGCTCTCCGGGGAGGATCAATCGGACGGAGGTCTGGATCTCGCGCGACGAGA 1125426
Query 1254403 TCGTG---TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGA 1254459
| || ||||| |||| || ||| || | |||||| | ||| ||| || |
Sbjct 1125425 TGGTCGACTTGCGGTTGTAGGA---CGCGAGCTTGGACGCCTCGCCGGCGAGGCGCTCAA 1125369
Query 1254460 TCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGG 1254519
||||||||||| |||||||| | || ||||| |||||| ||||| || |||||
Sbjct 1125368 AGATGTCGTTGACGAACGAGTTGAGGATGAGCATCGCCTTGTTCGAGATACCGGTGTCGG 1125309
Query 1254520 GGTGCACCTGCTTGAGCACCTTG 1254542
|||| |||||||| | |||||||
Sbjct 1125308 GGTGAACCTGCTTCAACACCTTG 1125286
Score = 95.1 bits (104), Expect = 1e-13
Identities = 157/225 (70%), Gaps = 9/225 (4%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||| || ||| ||| | | ||||| ||| || | ||| || |||||||||| ||
Sbjct 1406979 GCTTGGACAATTCTCCGGGGAGGATCAAGCGAACCGAGGTTTGAATCTCGCGCGACGAGA 1407038
Query 1254403 TCGTG---TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGA 1254459
| || ||||| |||| | | ||| || || |||||| | ||| ||| ||||
Sbjct 1407039 TGGTCGACTTGCGGTTGTACAA---CGCGAGCTTGCACGCCTCGCCGGCGAGGCGCTCGA 1407095
Query 1254460 TCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGG 1254519
||||||||||| |||||||| | || ||||| |||||| ||||| || |||||
Sbjct 1407096 AAATGTCGTTGACGAACGAGTTGAGGATGAGCATCGCCTTGTTCGAGATACCGGTGTCGG 1407155
Query 1254520 GGTGCACCTGCTTGAGCACCT---TGTAGATGAACGACGAGTACG 1254561
|||| || || || | ||| | |||||| | |||||| |||
Sbjct 1407156 GGTGGACTTGTTTCAACACTTTGCTGTAGAGGCGAGACGAGGACG 1407200
>seq79
Length=1842920
Score = 96.9 bits (106), Expect = 4e-14
Identities = 102/132 (77%), Gaps = 2/132 (2%)
Strand=Plus/Minus
Query 19053 ATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCC-GTG 19111
||||| || ||||| |||||||| ||||||| || || ||||| ||||| |||
Sbjct 225462 ATCGGTGGTACGGTCACGTGCGTCATCCGCAACGCTCCCTTCGGTCTCGGGGAGCCCGTG 225403
Query 19112 CTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGG 19171
|| |||||| | || ||| | |||||||| |||||||||||||| || ||||||||
Sbjct 225402 -TTCGACAAGCTGGAAGCCCTCTTGGCCCACGCGATGCTGTCGATCCCCGCGACCAAGGG 225344
Query 19172 ATTCGAGATTGG 19183
|||||||||||
Sbjct 225343 TTTCGAGATTGG 225332
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107129106043991
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