Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12- 23] 123 sequences; 24,532,870 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq49 105 6e-18 >seq49 Length=851403 Score = 105 bits (116), Expect = 6e-18 Identities = 152/209 (73%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 34399 TCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCGACCTGCGTTTGCGCGCCC 34458 ||||| | ||||||||| ||| | || ||| | | || | || || || ||||| Sbjct 535938 TCGTGCGCGCCGTTGACAATGTAGCGCTCGGTCTCGTCGTTGAAGGTCGCCTGGGCGCCA 535879 Query 34459 AGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACG-TCCAAGCGCCTTGGCGAT 34517 || |||||||| ||| |||| |||||||| | ||| || | ||| ||| |||| Sbjct 535878 AGTTCGCACCCAAAGAACTTGGTCGGGTACGACGACGGGCGGTTCAA-CGCTCGCGCGAC 535820 Query 34518 TTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCGACCTTGGCGCA 34577 |||| ||||||| || || ||||||||||||||||| ||||||| ||||| | Sbjct 535819 ATCGGCCATGTTGGGGAACACGGTCTTGATGCCGTTGCCGCGGCCTTCGATCTTGGTCAA 535760 Query 34578 GATGCGCGG-CATTTTGTAGCGGTAGAAC 34605 || ||| || ||| ||||||||||||||| Sbjct 535759 GA-GCGAGGGCATCTTGTAGCGGTAGAAC 535732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412840981124639