Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12-
23] 123 sequences; 24,532,870 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq31 86.0 1e-11
seq21 86.0 1e-11
>seq31
Length=897251
Score = 86.0 bits (94), Expect = 1e-11
Identities = 133/190 (70%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || || || || || |||||||| | || || || || ||||| ||||
Sbjct 114023 CAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGACACGATCGACAA 114082
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| ||||| ||||| || ||||| || ||| ||| ||| | || |||||
Sbjct 114083 CGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCAGCAACGTCTCATCTT 114142
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|||||| |||||| | || ||||| | ||| | || || |||||| |||| || |||||
Sbjct 114143 CGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCGGACTACAACATCCAAAAGGAGTC 114202
Query 206364 TACTCTTCAC 206373
|| || |||
Sbjct 114203 GACCCTCCAC 114212
>seq21
Length=1587489
Score = 86.0 bits (94), Expect = 1e-11
Identities = 133/190 (70%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || || || || || || ||||| | || || || || ||||| ||||
Sbjct 1354351 CAAGACCCTTACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACGATCGACAA 1354292
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| ||||| ||||| || ||||||||| || ||| ||| | || |||||
Sbjct 1354291 CGTCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCAGCAACGTCTCATCTT 1354232
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|||||| |||||| | || ||||| | ||| | || || |||||| |||| || |||||
Sbjct 1354231 CGCCGGCAAGCAGCTCGAGGATGGCCGTACTCTCGCGGACTACAACATCCAAAAGGAGTC 1354172
Query 206364 TACTCTTCAC 206373
|| || |||
Sbjct 1354171 GACCCTCCAC 1354162
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181818937524283
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |