Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12- 23] 123 sequences; 24,532,870 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq31 86.0 1e-11 seq21 86.0 1e-11 >seq31 Length=897251 Score = 86.0 bits (94), Expect = 1e-11 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || || || || || |||||||| | || || || || ||||| |||| Sbjct 114023 CAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGACACGATCGACAA 114082 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||| ||||| || ||||| || ||| ||| ||| | || ||||| Sbjct 114083 CGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCAGCAACGTCTCATCTT 114142 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||| |||||| | || ||||| | ||| | || || |||||| |||| || ||||| Sbjct 114143 CGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCGGACTACAACATCCAAAAGGAGTC 114202 Query 206364 TACTCTTCAC 206373 || || ||| Sbjct 114203 GACCCTCCAC 114212 >seq21 Length=1587489 Score = 86.0 bits (94), Expect = 1e-11 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || || || || || || ||||| | || || || || ||||| |||| Sbjct 1354351 CAAGACCCTTACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACGATCGACAA 1354292 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||| ||||| || ||||||||| || ||| ||| | || ||||| Sbjct 1354291 CGTCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCAGCAACGTCTCATCTT 1354232 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||| |||||| | || ||||| | ||| | || || |||||| |||| || ||||| Sbjct 1354231 CGCCGGCAAGCAGCTCGAGGATGGCCGTACTCTCGCGGACTACAACATCCAAAAGGAGTC 1354172 Query 206364 TACTCTTCAC 206373 || || ||| Sbjct 1354171 GACCCTCCAC 1354162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181818937524283