Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12- 23] 123 sequences; 24,532,870 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq79 134 1e-26 >seq79 Length=1842920 Score = 134 bits (148), Expect = 1e-26 Identities = 158/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || ||||| |||||| || |||||||| ||||| | || || | || || Sbjct 679100 CACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTC 679041 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || ||||| ||||||||||| | ||||| || |||||||||| Sbjct 679040 GAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTG 678981 Query 35647 GATCTTTTGCTTCAGAGTTGCC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 |||||| ||| | |||| | | |||||| ||| || ||||| | ||||||||||| Sbjct 678980 GATCTTGGCCTTGAC-GTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTT 678922 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || |||| || || || || || ||||| Sbjct 678921 TGCCGGTCAGGGTCTTGACGAAGATTTGCAT 678891 Score = 131 bits (144), Expect = 2e-25 Identities = 157/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || ||||| |||||| || |||||||| ||||| | || || | || || Sbjct 451896 CACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTC 451837 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || ||||| ||||||||||| | || | || |||||||||| Sbjct 451836 GAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTG 451777 Query 35647 GATCTTTTGCTTCAGAGTTGCC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 |||||| ||||| |||| | | |||||| ||| || ||||| | ||||||||||| Sbjct 451776 GATCTTGGCCTTCAC-GTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTTT 451718 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || |||| || || || || || ||||| Sbjct 451717 TGCCGGTCAGGGTCTTGACGAAGATTTGCAT 451687 Score = 131 bits (144), Expect = 2e-25 Identities = 157/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || ||||| |||||| || |||||||| ||||| | || || | || || Sbjct 452124 CACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTC 452065 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || ||||| ||||||||||| | || | || |||||||||| Sbjct 452064 GAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTG 452005 Query 35647 GATCTTTTGCTTCAGAGTTGCC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 ||||| ||| | |||| | | |||||| ||| || ||||| | ||||||||||| Sbjct 452004 AATCTTGGCCTTGAC-GTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTT 451946 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| |||| || || ||||| || ||||| Sbjct 451945 TACCGGTCAGGGTCTTGACAAAGATTTGCAT 451915 Score = 131 bits (144), Expect = 2e-25 Identities = 157/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || ||||| |||||| || |||||||| ||||| | || || | || || Sbjct 452352 CACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTC 452293 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || ||||| ||||||||||| | || | || |||||||||| Sbjct 452292 GAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTG 452233 Query 35647 GATCTTTTGCTTCAGAGTTGCC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 |||||| ||||| |||| | | |||||| ||| || ||||| | ||||||||||| Sbjct 452232 GATCTTGGCCTTCAC-GTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTTT 452174 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || |||| || || || || || ||||| Sbjct 452173 TGCCGGTCAGGGTCTTGACGAAGATTTGCAT 452143 Score = 131 bits (144), Expect = 2e-25 Identities = 157/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || ||||| |||||| || |||||||| ||||| | || || | || || Sbjct 452807 CACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTC 452748 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || ||||| ||||||||||| | || | || |||||||||| Sbjct 452747 GAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTG 452688 Query 35647 GATCTTTTGCTTCAGAGTTGCC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 ||||| ||| | |||| | | |||||| ||| || ||||| | ||||||||||| Sbjct 452687 AATCTTGGCCTTGAC-GTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTT 452629 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| |||| || || ||||| || ||||| Sbjct 452628 TACCGGTCAGGGTCTTGACAAAGATTTGCAT 452598 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||| || ||||| |||||| || || ||||| ||||| Sbjct 679345 CCACCACGGAGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATATTGTAGTCGGCG 679286 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || |||||||| || || || ||||| ||||||||||| | ||| Sbjct 679285 AGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGGG 679226 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCC-ACCGTGTCGCTCGATTCCAC 35688 | || |||||||||| ||||| ||| | |||| | | |||||| ||| || || Sbjct 679225 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGAC-GTTGTCGATCGTGTCCGACGACTCGAC 679167 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | |||||||||||| || |||| || || ||||| || ||||| Sbjct 679166 CTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGACAAAGATTTGCAT 679119 Score = 127 bits (140), Expect = 2e-24 Identities = 157/211 (74%), Gaps = 3/211 (1%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || ||||| |||||| || |||||||| ||||| | || || | || || Sbjct 452579 CACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTC 452520 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || ||||| ||||||||||| | || | || |||||||||| Sbjct 452519 GAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTG-GGGGATGCCCTCCTTGTCCTG 452461 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 |||||| ||||| |||| | | |||||| ||| || ||||| | ||||||||||| Sbjct 452460 GATCTTGGCCTTCA-CGTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTTT 452402 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || |||| || || || || || ||||| Sbjct 452401 TGCCGGTCAGGGTCTTGACGAAGATTTGCAT 452371 Score = 127 bits (140), Expect = 2e-24 Identities = 160/216 (74%), Gaps = 3/216 (1%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || ||||| |||||| || |||||||| ||||| | || || | || || Sbjct 678872 CACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTC 678813 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || ||||| ||||||||||| | ||| | || |||||||||| Sbjct 678812 GAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTG 678753 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 |||||| ||| | |||| | | |||||| ||| || ||||| | ||||||||| | Sbjct 678752 GATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTCT 678694 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCATTCTGT 35741 | || |||| || || || || || |||| ||||| Sbjct 678693 TGCCAGTCAGGGTCTTGACGAAGATTTGCA-TCTGT 678659 Score = 109 bits (120), Expect = 5e-19 Identities = 164/229 (72%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 35509 TCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGC 35568 ||| ||||| | | | |||||| || | ||| |||||| || ||||| || ||||| Sbjct 453052 TCCGCCACGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTATAGTCGGC 452993 Query 35569 CAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGG 35628 | || || | || || |||||||| || || || ||||| ||||||||||| | || Sbjct 452992 GAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTG-GGG 452934 Query 35629 AACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCA 35687 | || |||||||||| ||||| ||| | |||| | | |||||| ||| || | Sbjct 452933 GATGCCCTCCTTGTCCTGAATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGACGACTCAA 452875 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| | |||||||||||| || |||| || || || || || ||||| Sbjct 452874 CCTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 452826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450792906904840