Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12-
23] 123 sequences; 24,532,870 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq55 143 3e-29
seq44 120 4e-22
seq21 89.7 6e-13
>seq55
Length=958678
Score = 143 bits (158), Expect = 3e-29
Identities = 272/394 (69%), Gaps = 5/394 (1%)
Strand=Plus/Minus
Query 7232 CGCGTATACCAAGCCTCAACTTCGGAGATGTTTGGTAAAGTCCGAGAAACTCCACAAAAC 7291
||| | ||||||||||| || || ||| ||| || || ||| || || || ||| |
Sbjct 914249 CGCTTCTACCAAGCCTCGACCTCCGAGCTGTACGGCAAGGTCGTCGAGACCCCTCAATCC 914190
Query 7292 GAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTGG 7351
|| ||| ||||||||||| || ||| ||||||||| | ||| | || |||
Sbjct 914189 GAAACGACGCCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGCCTTCTGG 914130
Query 7352 CTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAAC 7411
||||||| || ||||||||||| |||| ||| |||||| || ||||||||||||
Sbjct 914129 ATCGTCAAGAACTACCGCGAGTCATACGACATGTACGCGTGCAATGGTATCCTCTTCAAC 914070
Query 7412 CATGAATCACCGAGACGAGGT-GCAGACTTTGTCACAAAGAAGATTAC-CGAGGGTATCA 7469
|| || || || | || ||| ||| ||| ||||| | ||||||| | ||| | | ||
Sbjct 914069 CACGAGTCCCCACGTCGTGGTCGCA-CCTTCGTCACGAGGAAGATTTCGCGA-GCTGTCG 914012
Query 7470 AACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGCGAGAG 7529
| ||| ||| || |||| | | | | | || ||||| | || | | |
Sbjct 914011 CCGAGATCTCACTCGGTCAACAGGACTGCCTCTACCTCGGCAACATGGAGGCCAAGCGTG 913952
Query 7530 ATTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAAG 7589
||||||| || ||| |||||||| || | |||||| | |||||||| || || |
Sbjct 913951 ATTGGGGACATGCGCGCGACTATGTCGAGGGCATGTGGATGATGCTTCAGCAGGA-CACC 913893
Query 7590 CCGACGAATATGTAGTAGCAACGGGTGAGACCCA 7623
||||||| | ||| | || ||||||||||||||
Sbjct 913892 CCGACGACTTTGTTCTCGCGACGGGTGAGACCCA 913859
>seq44
Length=493270
Score = 120 bits (132), Expect = 4e-22
Identities = 164/225 (73%), Gaps = 3/225 (1%)
Strand=Plus/Minus
Query 7232 CGCGTATACCAAGCCTCAACTTCGGAGATGTTTGGTAAAGTCCGAGAAACTCCACAAAAC 7291
||| | ||||| ||||| || |||||| ||| || || ||| || || || || |
Sbjct 207471 CGCTTCTACCAGGCCTCGACGTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTCC 207412
Query 7292 GAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTGG 7351
||| ||| ||||||||||| |||||| |||||||||| | ||| | || |||
Sbjct 207411 GAGACGACCCCCTTCTACCCTCGCTCGCCCTACGGAGTCGCCAAGTTGTACGCCTTCTGG 207352
Query 7352 CTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAAC 7411
||||||| || ||||||||||| |||| |||| |||||| ||| ||||||||||||
Sbjct 207351 ATCGTCAAGAACTACCGCGAGTCGTACGACATGTTCGCGTGCAACGGTATCCTCTTCAAC 207292
Query 7412 CATGAATCACCGAGACGAGGT-GCAGACTTTGTCACAAAGAAGAT 7455
|| || || || | || ||| ||| ||| ||||| | ||| ||
Sbjct 207291 CACGAGTC-CCCCGCCGTGGTCGCA-CCTTCGTCACGAGGAAAAT 207249
>seq21
Length=1587489
Score = 89.7 bits (98), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 94870 TGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGT 94929
||||||||||| ||||| |||||||| || ||||| |||||||||||||| ||||| ||
Sbjct 346361 TGGCTCAAGAAACGAGGCCTCATGCCCGGCCTCTGTTTCTCCAACGAGCTCATCTCCCGC 346302
Query 94930 GACGAGGGACTCCA 94943
||||| || |||||
Sbjct 346301 GACGAAGGTCTCCA 346288
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583259903236520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |