Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12- 23] 123 sequences; 24,532,870 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq44 147 2e-30 >seq44 Length=493270 Score = 147 bits (162), Expect = 2e-30 Identities = 238/340 (70%), Gaps = 2/340 (1%) Strand=Plus/Plus Query 30118 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCAC 30177 ||||||||| || | || ||||| | |||||| ||||| | | ||||| | || Sbjct 153386 GGGGTTCCAAGCACTCAAAATGATCCTCCTGTCGGTGGGGTTCTCCTTGATGCTCTTGAC 153445 Query 30178 GGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCAT-GTCCGTGTACT 30236 | | || |||||| |||||| ||| || || || | |||| | |||| Sbjct 153446 AACCTGCATCAACTGATCGACCCCCTCGCCCTGATAATCATCCTTGGCCGTCC-TATACT 153504 Query 30237 CTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGT 30296 |||| || |||||||||||||| ||||| || ||||| |||| || ||||||||||| | Sbjct 153505 CTGCCCCAAAATGCCTCCACTGAAACCCATAAACCGGCCCCAAATCCCCCTCTTCCCTAT 153564 Query 30297 GCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCC 30356 || | || || ||| ||||| || || | || || || | ||||| ||||| |||| Sbjct 153565 GCCCCAACCCAACCTTCTCCAAGAACTCCTTCGAGCCATTCCCATCCCAAATCTTGACCC 153624 Query 30357 CCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCA 30416 |||| || || | | ||| || | || || |||| ||||||||||| || ||||| | Sbjct 153625 CCTTGTCGGACAACAATTTCGAATCAGTCGATCCTCGAACGAACCACAGGAGTTCCTCAA 153684 Query 30417 CGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 || | | | ||||||| |||||||||| | ||||| Sbjct 153685 TGATGCCTCGCGTAAAGACCTTCTTGGTCGTCAAAAGGGG 153724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406309790915316