Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12- 23] 123 sequences; 24,532,870 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq79 111 1e-19 seq31 111 1e-19 seq21 102 7e-17 >seq79 Length=1842920 Score = 111 bits (122), Expect = 1e-19 Identities = 165/233 (71%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || || |||||||| || | || || || || || || |||| Sbjct 451915 ATGCAAATCTTTGTCAAGACCCTGACCGGTAAAACGATCACGCTCGAGGTCGAGTCGTCG 451974 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | ||||| || ||||| ||||| || ||||| || || || || Sbjct 451975 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCAG 452034 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGA---CAGTTCGACCGTTTCCGATTAC 27164 ||||| || || | ||| ||||| || | || || | || || || |||| ||| Sbjct 452035 CAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCG---CCGACTAC 452091 Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || ||||||||||| || || ||||| | ||| | || ||||| || Sbjct 452092 AACATCCAGAAGGAGTCGACGTTGCACTTGGTGCTCCGTCTCCGCGGTGGTAT 452144 Score = 111 bits (122), Expect = 1e-19 Identities = 165/233 (71%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || || |||||||| || | || || || || || || |||| Sbjct 452598 ATGCAAATCTTTGTCAAGACCCTGACCGGTAAAACGATCACGCTCGAGGTCGAGTCGTCG 452657 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | ||||| || ||||| ||||| || ||||| || || || || Sbjct 452658 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCAG 452717 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGA---CAGTTCGACCGTTTCCGATTAC 27164 ||||| || || | ||| ||||| || | || || | || || || |||| ||| Sbjct 452718 CAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCG---CCGACTAC 452774 Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || ||||||||||| || || ||||| | ||| | || ||||| || Sbjct 452775 AACATCCAGAAGGAGTCGACGTTGCACTTGGTGCTCCGTCTCCGCGGTGGTAT 452827 Score = 109 bits (120), Expect = 5e-19 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || || ||||||||||| | || || || || || || |||| Sbjct 679119 ATGCAAATCTTTGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTCGAGTCGTCG 679178 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | ||||| || ||||| ||||| || ||||| || || || || Sbjct 679179 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCTCCAGACCAG 679238 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATT---GGAAGACAGTTCGACCGTTTCCGATTAC 27164 ||||| || || | ||| ||||| || | ||| | | || || || |||| ||| Sbjct 679239 CAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCG---CCGACTAC 679295 Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || || ||||||||||| || || ||||| | ||| | || ||||| Sbjct 679296 AATATCCAGAAGGAGTCGACGTTGCACTTGGTGCTCCGTCTCCGTGGTGG 679345 Score = 105 bits (116), Expect = 6e-18 Identities = 164/233 (70%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || ||||||||||| | || || || || || || |||| Sbjct 678891 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTCGAGTCGTCG 678950 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | ||||| || || || ||||| || ||||| || || || || Sbjct 678951 GACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCAGACCAG 679010 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATT---GGAAGACAGTTCGACCGTTTCCGATTAC 27164 ||||| || || | ||| ||||| || | ||| | | || || || |||| ||| Sbjct 679011 CAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCG---CCGACTAC 679067 Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || ||||||||||| || || ||||| | ||| | || ||||| || Sbjct 679068 AACATCCAGAAGGAGTCGACGTTGCACTTGGTGCTCCGTCTCCGCGGTGGTAT 679120 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || ||||| |||||| | || || || || || || |||| Sbjct 678663 ATGCAAATCTTCGTCAAGACCCTGACTGGCAAGACGATCACGCTCGAGGTCGAGTCGTCG 678722 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | ||||| || || || ||||| || ||||| || || || || Sbjct 678723 GACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCAGACCAG 678782 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | ||| ||||| || | || || | || | |||| |||||| Sbjct 678783 CAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAAC 678842 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| || || ||||| | ||| | || ||||| || Sbjct 678843 ATCCAGAAGGAGTCGACGTTGCACTTGGTGCTCCGTCTCCGCGGTGGTAT 678892 Score = 102 bits (112), Expect = 7e-17 Identities = 163/233 (70%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || ||||||||||| | || || || || || || |||| Sbjct 451687 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTTGAGTCGTCG 451746 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | || || || || || ||||| || ||||| || || || || Sbjct 451747 GACACGATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 451806 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATT---GGAAGACAGTTCGACCGTTTCCGATTAC 27164 ||||| || || | ||| ||||| || | ||| | | || || || |||| ||| Sbjct 451807 CAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCG---CCGACTAC 451863 Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || ||||||||||| || || ||||| | ||| | || ||||| || Sbjct 451864 AACATCCAGAAGGAGTCGACGTTGCACTTGGTGCTCCGTCTCCGCGGTGGTAT 451916 Score = 102 bits (112), Expect = 7e-17 Identities = 163/233 (70%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || ||||||||||| | || || || || || || |||| Sbjct 452143 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTTGAGTCGTCG 452202 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | || || || || || ||||| || ||||| || || || || Sbjct 452203 GACACGATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 452262 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATT---GGAAGACAGTTCGACCGTTTCCGATTAC 27164 ||||| || || | ||| ||||| || | ||| | | || || || |||| ||| Sbjct 452263 CAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCG---CCGACTAC 452319 Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || ||||||||||| || || ||||| | ||| | || ||||| || Sbjct 452320 AACATCCAGAAGGAGTCGACGTTGCACTTGGTGCTCCGTCTCCGCGGTGGTAT 452372 Score = 98.7 bits (108), Expect = 9e-16 Identities = 163/233 (70%), Gaps = 7/233 (3%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || ||||||||||| | || || || || || || |||| Sbjct 452371 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTTGAGTCGTCG 452430 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | || || || || || ||||| || ||||| || || || || Sbjct 452431 GACACGATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCC-CCAGACCAG 452489 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGA---CAGTTCGACCGTTTCCGATTAC 27164 ||||| || || | ||| ||||| || | || || | || || || |||| ||| Sbjct 452490 CAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCG---CCGACTAC 452546 Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || ||||||||||| || || ||||| | ||| | || ||||| || Sbjct 452547 AACATCCAGAAGGAGTCGACGTTGCACTTGGTGCTCCGTCTCCGCGGTGGTAT 452599 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/230 (70%), Gaps = 7/230 (3%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || ||||||||||| | || || || || || || |||| Sbjct 452826 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTTGAGTCGTCG 452885 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | ||||| || ||||| ||||| || ||||| || || || || Sbjct 452886 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCAT-CCCCCAGACCAG 452944 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATT---GGAAGACAGTTCGACCGTTTCCGATTAC 27164 ||||| || || | ||| ||||| || | ||| | | || || || |||| || Sbjct 452945 CAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCG---CCGACTAT 453001 Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||| || ||||||||||| | || ||||| | ||| | || || || Sbjct 453002 AACATCCAGAAGGAGTCGACGCTCCACTTGGTGCTCCGTCTCCGTGGCGG 453051 >seq31 Length=897251 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 || ||| || || || || ||||| || |||||| | || || || || || || |||| Sbjct 114008 CAGGCAAATCTTCGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTC 114067 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| |||| || | ||||| || || |||||||| |||||||| || || || || Sbjct 114068 CGACACGATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCA 114127 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 || ||| | || | ||||||||| || | || || | || | | || ||||| Sbjct 114128 GCAACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCGGACTACAA 114187 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| ||||||||||||||| | || ||||| | || | || ||||| || Sbjct 114188 CATCCAAAAGGAGTCGACCCTCCACTTGGTCCTCCGCCTCCGAGGTGGTAT 114238 >seq21 Length=1587489 Score = 102 bits (112), Expect = 7e-17 Identities = 158/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 26989 TGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCG 27048 |||| || || || || || || || |||||| | || || || || || || | |||| Sbjct 1354364 TGCAAATCTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCG 1354305 Query 27049 ACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAAC 27108 || |||| || | ||||| || || |||||||| ||||| || || || || || | Sbjct 1354304 ACACGATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCAGC 1354245 Query 27109 AGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACA 27168 | ||| | || | ||||||||| || | || || | || | | || ||||||| Sbjct 1354244 AACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACTCTCGCGGACTACAACA 1354185 Query 27169 TTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 | ||||||||||||||| | || ||||| | || |||| ||||| Sbjct 1354184 TCCAAAAGGAGTCGACCCTCCACTTGGTGCTCCGCCTGCGCGGTGG 1354139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434917731312960