Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12- 23] 123 sequences; 24,532,870 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq21 174 4e-38 seq31 172 1e-37 seq79 143 6e-29 >seq21 Length=1587489 Score = 174 bits (192), Expect = 4e-38 Identities = 165/211 (78%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || ||||| ||||||||||| || ||||| || || | ||||| Sbjct 1354154 AGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGAGTACGGCCATCC 1354213 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || ||||| ||||| || |||| |||||||||||| Sbjct 1354214 TCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGGGGAATTCCTTCCTTGTCT 1354273 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||| ||||| ||| || |||||||| ||||| ||| Sbjct 1354274 TGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGAGGACTCGACCTCGAGGGTGATGGTC 1354333 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCA 211113 || ||||| || ||||| || || | |||| Sbjct 1354334 TTGCCCGTAAGGGTCTTGACGAAGATTTGCA 1354364 >seq31 Length=897251 Score = 172 bits (190), Expect = 1e-37 Identities = 160/203 (79%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| || || ||||| ||||||||||| || ||||| || || | ||||| Sbjct 114220 AGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGAGTGCGGCCATCC 114161 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || ||||| ||||| || || | ||||||||||| Sbjct 114160 TCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCT 114101 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||| ||||| || || |||||||| ||||||||| Sbjct 114100 TGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTC 114041 Query 211083 TTTCCCGTGAGAGTCTTTACAAA 211105 || ||||| |||||||| || || Sbjct 114040 TTGCCCGTAAGAGTCTTGACGAA 114018 >seq79 Length=1842920 Score = 143 bits (158), Expect = 6e-29 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || ||||| || |||||||| || || || || || | ||||| || ||||||||||| Sbjct 451883 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCA 451824 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 |||||||| | || || ||||| || || | || ||||||||||||||||| ||| Sbjct 451823 GCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTC 451764 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 ||||| ||||| ||||| || ||||||||||| |||||||| || || || || ||| Sbjct 451763 ACGTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTC 451704 Query 211098 TTTACAAACACCTGCAT 211114 || || || | ||||| Sbjct 451703 TTGACGAAGATTTGCAT 451687 Score = 143 bits (158), Expect = 6e-29 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || ||||| || |||||||| || || || || || | ||||| || ||||||||||| Sbjct 452339 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCA 452280 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 |||||||| | || || ||||| || || | || ||||||||||||||||| ||| Sbjct 452279 GCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTC 452220 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 ||||| ||||| ||||| || ||||||||||| |||||||| || || || || ||| Sbjct 452219 ACGTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTC 452160 Query 211098 TTTACAAACACCTGCAT 211114 || || || | ||||| Sbjct 452159 TTGACGAAGATTTGCAT 452143 Score = 143 bits (158), Expect = 6e-29 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || ||||| || |||||||| || || || || || | ||||| || ||||||||||| Sbjct 678859 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCA 678800 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 |||||||| | || || ||||| ||||| | || ||||||||||||||||| || Sbjct 678799 GCGAAGATCAATCGCTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 678740 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 ||||| ||||| ||||| || || |||||||| ||||||||||| || || || ||| Sbjct 678739 ACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTCTTGCCAGTCAGGGTC 678680 Query 211098 TTTACAAACACCTGCAT 211114 || || || | ||||| Sbjct 678679 TTGACGAAGATTTGCAT 678663 Score = 143 bits (158), Expect = 6e-29 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || ||||| || |||||||| || || || || || | ||||| || ||||||||||| Sbjct 679087 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCA 679028 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 |||||||| | || || ||||| ||||||| || ||||||||||||||||| || Sbjct 679027 GCGAAGATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 678968 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 ||||| ||||| ||||| || || |||||||| |||||||| || || || || ||| Sbjct 678967 ACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTC 678908 Query 211098 TTTACAAACACCTGCAT 211114 || || || | ||||| Sbjct 678907 TTGACGAAGATTTGCAT 678891 Score = 140 bits (154), Expect = 8e-28 Identities = 150/197 (76%), Gaps = 1/197 (1%) Strand=Plus/Minus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || ||||| || |||||||| || || || || || | ||||| || ||||||||||| Sbjct 452566 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCA 452507 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 |||||||| | || || ||||| || ||| ||| |||||||||||||||| ||| Sbjct 452506 GCGAAGATCAATCGCTGCTGGTCTGGGGGATGCCCT-CCTTGTCCTGGATCTTGGCCTTC 452448 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 ||||| ||||| ||||| || ||||||||||| |||||||| || || || || ||| Sbjct 452447 ACGTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTC 452388 Query 211098 TTTACAAACACCTGCAT 211114 || || || | ||||| Sbjct 452387 TTGACGAAGATTTGCAT 452371 Score = 140 bits (154), Expect = 8e-28 Identities = 159/212 (75%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || ||||| || ||||||||||| || || || || | ||||| Sbjct 453036 AGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTATAGTCGGCGAGCGTACGGCCATCC 452977 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| | || || ||||| || || | || ||||||||| Sbjct 452976 TCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGG-GGGATGCCCTCCTTGTCC 452918 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| ||||| ||||| || ||||||||||| |||||||| Sbjct 452917 TGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTT 452858 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | ||||| Sbjct 452857 TTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 452826 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || ||||| || |||||||| || || || || || | ||||| || ||||||||||| Sbjct 452111 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCA 452052 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 |||||||| | || || ||||| || || | || ||||||||||| ||||| || Sbjct 452051 GCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTG 451992 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 ||||| ||||| ||||| || || |||||||| |||||||| || || || || ||| Sbjct 451991 ACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTTTACCGGTCAGGGTC 451932 Query 211098 TTTACAAACACCTGCAT 211114 || ||||| | ||||| Sbjct 451931 TTGACAAAGATTTGCAT 451915 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || ||||| || |||||||| || || || || || | ||||| || ||||||||||| Sbjct 452794 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCA 452735 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 |||||||| | || || ||||| || || | || ||||||||||| ||||| || Sbjct 452734 GCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTG 452675 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 ||||| ||||| ||||| || || |||||||| |||||||| || || || || ||| Sbjct 452674 ACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTTTACCGGTCAGGGTC 452615 Query 211098 TTTACAAACACCTGCAT 211114 || ||||| | ||||| Sbjct 452614 TTGACAAAGATTTGCAT 452598 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || ||||| || ||||| || || || || || || | ||||| || ||||||||||| Sbjct 679315 GTCGACTCCTTCTGGATATTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCA 679256 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 |||||||| | || || ||||| ||||| | || ||||||||||| ||||| || Sbjct 679255 GCGAAGATCAATCGCTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTG 679196 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 ||||| ||||| ||||| || || |||||||| |||||||| || || || || ||| Sbjct 679195 ACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTC 679136 Query 211098 TTTACAAACACCTGCAT 211114 || ||||| | ||||| Sbjct 679135 TTGACAAAGATTTGCAT 679119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159150173248895