Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12-
23] 123 sequences; 24,532,870 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq31 154 4e-32
seq21 147 5e-30
seq79 125 2e-23
>seq31
Length=897251
Score = 154 bits (170), Expect = 4e-32
Identities = 160/210 (76%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| | |||||| || || || ||||||| ||||| || || | ||| | |||||
Sbjct 114220 AGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGAGTGCGGCCATCC 114161
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || |||||||| || ||||| ||||| ||||| || ||||||||||||
Sbjct 114160 TCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCT 114101
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || ||||| ||||| || | || || || | |||||||||
Sbjct 114100 TGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTC 114041
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGC 225711
|||||||| | ||| || | ||| | ||||
Sbjct 114040 TTGCCCGTAAGAGTCTTGACGAAGATTTGC 114011
>seq21
Length=1587489
Score = 147 bits (162), Expect = 5e-30
Identities = 159/211 (75%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | |||||| || || || ||||||| ||||| || || | ||| | |||||
Sbjct 1354154 AGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGAGTACGGCCATCC 1354213
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || |||||||| || ||||| ||||| || ||||| ||||||||||||
Sbjct 1354214 TCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGGGGAATTCCTTCCTTGTCT 1354273
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || ||||| ||||| |||| || || || | ||||| |||
Sbjct 1354274 TGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGAGGACTCGACCTCGAGGGTGATGGTC 1354333
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCA 225712
|||||||| | || || | ||| | |||||
Sbjct 1354334 TTGCCCGTAAGGGTCTTGACGAAGATTTGCA 1354364
>seq79
Length=1842920
Score = 125 bits (138), Expect = 2e-23
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576
|| || || || |||| ||||| ||||| | || | ||||| || |||||||| |||
Sbjct 451883 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCA 451824
Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636
|||||||| | ||| || ||||| || || || || |||||||| |||||||| ||||
Sbjct 451823 GCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTC 451764
Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696
|| ||||| ||||| || | || || || | ||||||||| ||||| |||| ||
Sbjct 451763 ACGTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTC 451704
Query 225697 TTTATGAACACTTGCAT 225713
|| | ||| | ||||||
Sbjct 451703 TTGACGAAGATTTGCAT 451687
Score = 125 bits (138), Expect = 2e-23
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576
|| || || || |||| ||||| ||||| | || | ||||| || |||||||| |||
Sbjct 452339 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCA 452280
Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636
|||||||| | ||| || ||||| || || || || |||||||| |||||||| ||||
Sbjct 452279 GCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTC 452220
Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696
|| ||||| ||||| || | || || || | ||||||||| ||||| |||| ||
Sbjct 452219 ACGTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTC 452160
Query 225697 TTTATGAACACTTGCAT 225713
|| | ||| | ||||||
Sbjct 452159 TTGACGAAGATTTGCAT 452143
Score = 125 bits (138), Expect = 2e-23
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576
|| || || || |||| ||||| ||||| | || | ||||| || |||||||| |||
Sbjct 678859 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCA 678800
Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636
|||||||| | ||| || ||||| || || || || |||||||| |||||||| |||
Sbjct 678799 GCGAAGATCAATCGCTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 678740
Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696
|| ||||| ||||| || | || || || | ||||||||||||||| |||| ||
Sbjct 678739 ACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTCTTGCCAGTCAGGGTC 678680
Query 225697 TTTATGAACACTTGCAT 225713
|| | ||| | ||||||
Sbjct 678679 TTGACGAAGATTTGCAT 678663
Score = 125 bits (138), Expect = 2e-23
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576
|| || || || |||| ||||| ||||| | || | ||||| || |||||||| |||
Sbjct 679087 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCA 679028
Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636
|||||||| | ||| || ||||| || ||||| || |||||||| |||||||| |||
Sbjct 679027 GCGAAGATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 678968
Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696
|| ||||| ||||| || | || || || | ||||||||| ||||| |||| ||
Sbjct 678967 ACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTC 678908
Query 225697 TTTATGAACACTTGCAT 225713
|| | ||| | ||||||
Sbjct 678907 TTGACGAAGATTTGCAT 678891
Score = 122 bits (134), Expect = 2e-22
Identities = 146/197 (74%), Gaps = 1/197 (1%)
Strand=Plus/Minus
Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576
|| || || || |||| ||||| ||||| | || | ||||| || |||||||| |||
Sbjct 452566 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCA 452507
Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636
|||||||| | ||| || ||||| || || || || |||||||| |||||||| ||||
Sbjct 452506 GCGAAGATCAATCGCTGCTGGTCTGG-GGGATGCCCTCCTTGTCCTGGATCTTGGCCTTC 452448
Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696
|| ||||| ||||| || | || || || | ||||||||| ||||| |||| ||
Sbjct 452447 ACGTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTC 452388
Query 225697 TTTATGAACACTTGCAT 225713
|| | ||| | ||||||
Sbjct 452387 TTGACGAAGATTTGCAT 452371
Score = 118 bits (130), Expect = 3e-21
Identities = 154/212 (73%), Gaps = 1/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | |||||| || || || || |||| || || ||||| | || | |||||
Sbjct 453036 AGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTATAGTCGGCGAGCGTACGGCCATCC 452977
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||||||||| | ||| || ||||| || || || || ||||||||
Sbjct 452976 TCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGG-GGGATGCCCTCCTTGTCC 452918
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| ||| || ||||| ||||| || | || || || | |||||||||
Sbjct 452917 TGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTT 452858
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| |||| || || | ||| | ||||||
Sbjct 452857 TTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 452826
Score = 116 bits (128), Expect = 9e-21
Identities = 144/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576
|| || || || |||| |||||| ||||| | || | ||||| || |||||||| |||
Sbjct 679315 GTCGACTCCTTCTGGATATTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCA 679256
Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636
|||||||| | ||| || ||||| || || || || |||||||| || ||||| |||
Sbjct 679255 GCGAAGATCAATCGCTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTG 679196
Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696
|| ||||| ||||| || | || || || | ||||||||| ||||| |||| ||
Sbjct 679195 ACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTC 679136
Query 225697 TTTATGAACACTTGCAT 225713
|| | || | ||||||
Sbjct 679135 TTGACAAAGATTTGCAT 679119
Score = 107 bits (118), Expect = 5e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576
|| || || || |||| ||||| ||||| | || | ||||| || |||||||| |||
Sbjct 452111 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCA 452052
Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636
|||||||| | ||| || ||||| || || || || |||||||| || ||||| |||
Sbjct 452051 GCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTG 451992
Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696
|| ||||| ||||| || | || || || | ||||||||| || || |||| ||
Sbjct 451991 ACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTTTACCGGTCAGGGTC 451932
Query 225697 TTTATGAACACTTGCAT 225713
|| | || | ||||||
Sbjct 451931 TTGACAAAGATTTGCAT 451915
Score = 107 bits (118), Expect = 5e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576
|| || || || |||| ||||| ||||| | || | ||||| || |||||||| |||
Sbjct 452794 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCA 452735
Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636
|||||||| | ||| || ||||| || || || || |||||||| || ||||| |||
Sbjct 452734 GCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTG 452675
Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696
|| ||||| ||||| || | || || || | ||||||||| || || |||| ||
Sbjct 452674 ACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTTTACCGGTCAGGGTC 452615
Query 225697 TTTATGAACACTTGCAT 225713
|| | || | ||||||
Sbjct 452614 TTGACAAAGATTTGCAT 452598
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192529320645362
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