Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12- 23] 123 sequences; 24,532,870 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq79 187 5e-42 seq31 187 5e-42 seq21 179 8e-40 seq36 95.1 3e-14 >seq79 Length=1842920 Score = 187 bits (206), Expect = 5e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || || || |||| || ||||| || || |||||||||||||| || Sbjct 678890 ACCACCGCGGAGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGC 678831 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||||||||| || || || || || |||||||| || || ||||| || Sbjct 678830 GAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGG 678771 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| || || ||| | ||||| |||||||| | ||||| Sbjct 678770 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCGAC 678711 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||||||||| || |||| ||||| ||||| || ||||| Sbjct 678710 CTCGAGCGTGATCGTCTTGCCAGTCAGGGTCTTGACGAAGATTTGCAT 678663 Score = 181 bits (200), Expect = 2e-40 Identities = 177/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || || || |||| || ||||| || || |||||||||||||| || Sbjct 679118 ACCACCGCGGAGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGC 679059 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||| ||||||||||| || || || || || |||||||| || || ||||| || Sbjct 679058 GAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGG 678999 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| |||||||| || || ||| | ||||| |||||||| | ||||| Sbjct 678998 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCGAC 678939 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| |||||||| || || |||| ||||| ||||| || ||||| Sbjct 678938 CTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 678891 Score = 172 bits (190), Expect = 1e-37 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || || || |||| || ||||| || || |||||||||||||| || Sbjct 451914 ACCACCGCGGAGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGC 451855 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||| ||||||||||| || || || || || |||||||| || || ||||| || Sbjct 451854 GAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGG 451795 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| || || ||| | ||||| |||||||| | || || Sbjct 451794 GATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCCGACGACTCAAC 451735 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| |||||||| || || |||| ||||| ||||| || ||||| Sbjct 451734 CTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 451687 Score = 172 bits (190), Expect = 1e-37 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || || || |||| || ||||| || || |||||||||||||| || Sbjct 452142 ACCACCGCGGAGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGC 452083 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||| ||||||||||| || || || || || |||||||| || || ||||| || Sbjct 452082 GAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGG 452023 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| || ||||| || || ||| | ||||| |||||||| | ||||| Sbjct 452022 GATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCGAC 451963 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| |||||||| ||||| |||| ||||| || || || ||||| Sbjct 451962 CTCGAGCGTGATCGTTTTACCGGTCAGGGTCTTGACAAAGATTTGCAT 451915 Score = 172 bits (190), Expect = 1e-37 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || || || |||| || ||||| || || |||||||||||||| || Sbjct 452370 ACCACCGCGGAGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGC 452311 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||| ||||||||||| || || || || || |||||||| || || ||||| || Sbjct 452310 GAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGG 452251 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| || || ||| | ||||| |||||||| | || || Sbjct 452250 GATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCCGACGACTCAAC 452191 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| |||||||| || || |||| ||||| ||||| || ||||| Sbjct 452190 CTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 452143 Score = 172 bits (190), Expect = 1e-37 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || || || |||| || ||||| || || |||||||||||||| || Sbjct 452825 ACCACCGCGGAGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGC 452766 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||| ||||||||||| || || || || || |||||||| || || ||||| || Sbjct 452765 GAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGG 452706 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| || ||||| || || ||| | ||||| |||||||| | ||||| Sbjct 452705 GATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCGAC 452646 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| |||||||| ||||| |||| ||||| || || || ||||| Sbjct 452645 CTCGAGCGTGATCGTTTTACCGGTCAGGGTCTTGACAAAGATTTGCAT 452598 Score = 168 bits (186), Expect = 1e-36 Identities = 175/228 (77%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || || || |||| || ||||| || || |||||||||||||| || Sbjct 452597 ACCACCGCGGAGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGC 452538 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||| ||||||||||| || || || || || |||||||| || || ||||| || Sbjct 452537 GAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGG 452478 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 | | ||||||||||| |||||||| || || ||| | ||||| |||||||| | || || Sbjct 452477 A-TGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCCGACGACTCAAC 452419 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| |||||||| || || |||| ||||| ||||| || ||||| Sbjct 452418 CTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 452371 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| || ||||| || || ||||| |||||||| || Sbjct 679346 ACCACCACGGAGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATATTGTAGTCGGC 679287 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||| ||||||||||| || || || || || |||||||| || || ||||| || Sbjct 679286 GAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGG 679227 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| || ||||| || || ||| | ||||| |||||||| | ||||| Sbjct 679226 GATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCGAC 679167 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| |||||||| || || |||| ||||| || || || ||||| Sbjct 679166 CTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGACAAAGATTTGCAT 679119 Score = 154 bits (170), Expect = 3e-32 Identities = 171/227 (75%), Gaps = 1/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || || || |||| || | ||| || || |||||||| ||||| || Sbjct 453051 CCGCCACGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTATAGTCGGCG 452992 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||| ||||||||||| || || || || || |||||||| || || ||||| ||| Sbjct 452991 AGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGA 452932 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 | ||||||||||| || ||||| || || ||| | ||||| |||||||| | || || Sbjct 452931 -TGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCAACC 452873 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| |||||||| || || |||| ||||| ||||| || ||||| Sbjct 452872 TCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 452826 >seq31 Length=897251 Score = 187 bits (206), Expect = 5e-42 Identities = 177/226 (78%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || ||||| || |||| || | || || ||||||||||||||||| || Sbjct 114236 ACCACCTCGGAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGC 114177 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || ||||| ||||| | |||||| ||||| ||| Sbjct 114176 GAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGG 114117 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || ||||||||||||||||| || || ||| | ||||| ||||| || | ||||| Sbjct 114116 GATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGACGACTCGAC 114057 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGC 283097 ||||| ||||||||||| ||||| | |||||| ||||| || ||| Sbjct 114056 CTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACGAAGATTTGC 114011 >seq21 Length=1587489 Score = 179 bits (198), Expect = 8e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| |||||||| || |||| || | || || ||||||||||||||||| || Sbjct 1354138 ACCACCGCGCAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGC 1354197 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||||||||| || || || ||||| ||||| | |||||| ||||| || Sbjct 1354198 GAGAGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGGGG 1354257 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || ||||||||||||||||| || || ||| | ||||| ||||| || | ||||| Sbjct 1354258 AATTCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGAGGACTCGAC 1354317 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCA 283098 ||||| ||||| ||||| ||||| | ||||| ||||| || |||| Sbjct 1354318 CTCGAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAAGATTTGCA 1354364 >seq36 Length=1210608 Score = 95.1 bits (104), Expect = 3e-14 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 316183 TAACGCCATTGGATGTACTGATTGGGCGTCATGTCAAGATGATCCTCGATGTGGTGGAAA 316242 |||||||| ||||||||||| | | |||| | || || || ||||||||||||||||| Sbjct 948562 TAACGCCACTGGATGTACTGCATCGCCGTCTTCTCGAGGTGCTCCTCGATGTGGTGGAAC 948503 Query 316243 GCGTGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTC 316284 ||||| || || ||||| |||| ||||| || || |||||| Sbjct 948502 GCGTGTTGGGCGACGTACGCAACACGCAAGTTGGGGTGCTTC 948461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046737550404442