Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900009495.1_202016-12- 23] 223 sequences; 35,405,415 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq135 100 2e-16 >seq135 Length=558922 Score = 100 bits (110), Expect = 2e-16 Identities = 228/339 (67%), Gaps = 8/339 (2%) Strand=Plus/Plus Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAAC 101986 |||||||||| || | ||||| ||||| || || || || ||| | | | | | Sbjct 207405 TTCCAAGCACTCAAGATGATCCTCCTATCGGTGGGATTCTCCTTGATACTCTTGACAACC 207464 Query 101987 TGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTT--TATATTCTG 102044 || | || || || ||||| || || | |||||| || || | |||| |||| Sbjct 207465 TGCATCAACTGATCGACTCCCTCCCCCTGATAATCAT--CCTTGGCCGTCCTATACTCTG 207522 Query 102045 CTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCAT 102104 | || ||||||||||| || || ||||| || ||||| | ||| || || || || | | Sbjct 207523 CGCCAAAATGCCTCCATTGGAACCCATAAACCGGTCCCAAATCCCCCTCTTCCCTATGAC 207582 Query 102105 AAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAG 102164 || |||| ||| || ||||| ||| ||||||||| |||||||||| | || || Sbjct 207583 CCAACCCAACTTTGTCCAAAAACTGTCTCGATCCATTCCCATCCCAAATTTTGACCCC-- 207640 Query 102165 CTGCT--GATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAAC 102222 || || || | ||| || || ||||||| | ||||| | ||||| || | Sbjct 207641 CTTCTCGGACAATAATTTAGAATCGGTCGATCCTCGAACGAACCAAAGTAGTTCCTCGAT 207700 Query 102223 AACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGG 102261 | ||||| | ||| ||| |||| || || ||||| || Sbjct 207701 GATACCTCGCGTAAAGACTTTCTTGGTGGTCAAAAGGGG 207739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361250218186973