Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900009495.1_202016-12-
23] 223 sequences; 35,405,415 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq135 100 2e-16
>seq135
Length=558922
Score = 100 bits (110), Expect = 2e-16
Identities = 228/339 (67%), Gaps = 8/339 (2%)
Strand=Plus/Plus
Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAAC 101986
|||||||||| || | ||||| ||||| || || || || ||| | | | | |
Sbjct 207405 TTCCAAGCACTCAAGATGATCCTCCTATCGGTGGGATTCTCCTTGATACTCTTGACAACC 207464
Query 101987 TGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTT--TATATTCTG 102044
|| | || || || ||||| || || | |||||| || || | |||| ||||
Sbjct 207465 TGCATCAACTGATCGACTCCCTCCCCCTGATAATCAT--CCTTGGCCGTCCTATACTCTG 207522
Query 102045 CTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCAT 102104
| || ||||||||||| || || ||||| || ||||| | ||| || || || || | |
Sbjct 207523 CGCCAAAATGCCTCCATTGGAACCCATAAACCGGTCCCAAATCCCCCTCTTCCCTATGAC 207582
Query 102105 AAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAG 102164
|| |||| ||| || ||||| ||| ||||||||| |||||||||| | || ||
Sbjct 207583 CCAACCCAACTTTGTCCAAAAACTGTCTCGATCCATTCCCATCCCAAATTTTGACCCC-- 207640
Query 102165 CTGCT--GATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAAC 102222
|| || || | ||| || || ||||||| | ||||| | ||||| || |
Sbjct 207641 CTTCTCGGACAATAATTTAGAATCGGTCGATCCTCGAACGAACCAAAGTAGTTCCTCGAT 207700
Query 102223 AACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGG 102261
| ||||| | ||| ||| |||| || || ||||| ||
Sbjct 207701 GATACCTCGCGTAAAGACTTTCTTGGTGGTCAAAAGGGG 207739
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361250218186973
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |