Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900009495.1_202016-12-
23] 223 sequences; 35,405,415 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq135 84.2 3e-11
>seq135
Length=558922
Score = 84.2 bits (92), Expect = 3e-11
Identities = 182/270 (67%), Gaps = 2/270 (1%)
Strand=Plus/Plus
Query 145998 CTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGA-GTCCACGTACGCGGCCCCGAAGT 146056
||| || || |||| |||| | ||||| ||||| |||| ||| | || || || |
Sbjct 207473 CTGATCGACTCCCTCCCCCTGATAATCATCCTTGGCCGTCCTA-TACTCTGCGCCAAAAT 207531
Query 146057 GCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGG 146116
||||||| |||||||| || || || |||| ||||| ||||| || |||| |||
Sbjct 207532 GCCTCCATTGGAACCCATAAACCGGTCCCAAATCCCCCTCTTCCCTATGACCCAACCCAA 207591
Query 146117 CCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGA 146176
| | | | || | | || || || | ||||| || ||||| ||| || |||| |
Sbjct 207592 CTTTGTCCAAAAACTGTCTCGATCCATTCCCATCCCAAATTTTGACCCCCTTCTCGGACA 207651
Query 146177 GCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCC 146236
|| || || || || || | | |||||| || || || |||| || || | |
Sbjct 207652 ATAATTTAGAATCGGTCGATCCTCGAACGAACCAAAGTAGTTCCTCGATGATACCTCGCG 207711
Query 146237 AGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266
||||| |||||||||||| |||||||
Sbjct 207712 TAAAGACTTTCTTGGTGGTCAAAAGGGGGA 207741
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590075155160920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |