Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900009495.1_202016-12- 23] 223 sequences; 35,405,415 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq107 141 2e-28 >seq107 Length=347312 Score = 141 bits (156), Expect = 2e-28 Identities = 463/715 (65%), Gaps = 11/715 (2%) Strand=Plus/Plus Query 248758 GTCATTCAGGACAACGCGCACCTCCTGGACGGCGCGATTGACTACGGCAAAGATTTGGAG 248817 ||||| || |||||| ||| ||| || |||| || ||||| | ||||| | Sbjct 17138 GTCATCATGGCCAACGCCGACCGCCTCAACAGCGCCGTTATCTACGACCGCGATTTCGGC 17197 Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877 ||| ||| ||||| ||||||||||| ||| || || | || || || |||||| Sbjct 17198 TACAATTACTTTGGCTTCAAAACGCTCGAGCGCTCCTACTTGCTTCGCATCGACGGCAAG 17257 Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937 ||| ||||| ||||||||| | ||||| || || ||||| || ||| | ||| Sbjct 17258 GTCGCCGAACGCCCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGAC 17317 Query 248938 ATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACA 248997 || ||| |||| | || | |||| | ||| || |||| | || || ||| | Sbjct 17318 ATTGAGCGCGTCTTGCAGTCTTACAACCTCATGTCCGAGCGCTACTTTACCCACGCCTCG 17377 Query 248998 CCGACGCTCTTCAACGCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGC 249056 |||||||||||||||||||| || | || || ||||| || || || || | | Sbjct 17378 CCGACGCTCTTCAACGCCGGAACGCCTC-ACCCGCAGCTTTCGTCCTGTTTCCTGGTCAC 17436 Query 249057 CATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACG---GCGAAGAT 249113 ||| | || || || | || |||||||| |||||||| | ||||| ||| || Sbjct 17437 GATGAAGGATGATTCGATTGAAGGCATTTACGACACGCTCA---AGACGTGCGCGCTCAT 17493 Query 249114 TTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTA 249173 || || ||| || || |||||| | | || ||||||||| || | || || || Sbjct 17494 CTCCAAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGCAACCGGCTCCTA 17553 Query 249174 CATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTC 249233 |||| || || || || | | || ||||| ||| | || || || | Sbjct 17554 CATCGCCGGCACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAA 17613 Query 249234 CACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTT 249290 ||| || | | | || |||| | || | || || | ||||| || || | Sbjct 17614 CACGGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCT 17673 Query 249291 GGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGA 249350 || ||||||||| || | || |||||||||||| | ||||| ||||||| || Sbjct 17674 CGAGCCGTGGCACGCTGACGTCTTTGAGTTCCTGGACCTTCGCAAGAATCACGGCAAGGA 17733 Query 249351 GCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCG 249410 | | | || ||||| ||||||| | || ||| | |||| | |||||| || Sbjct 17734 GGAAGTCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTCTTCATGGAGCG 17793 Query 249411 CGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGACGCCCCGGACCTC 249465 ||| |||||| |||||| ||| | || | | || |||| ||||| | |||| Sbjct 17794 TGTCGAGGCCGCCGGCGAGTGGCCTCTCTTCTGCCCCGCCGAAGCCCCCGGCCTC 17848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073763332048064