Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900009495.1_202016-12- 23] 223 sequences; 35,405,415 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq46 111 1e-19 seq120 107 2e-18 >seq46 Length=591722 Score = 111 bits (122), Expect = 1e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || |||||||| ||||| ||||||||| |||||||| || || ||| | || Sbjct 538709 AACACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTGCGGCCATCC 538768 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || || || || ||||| ||||| || |||||||| || || | |||||||||||| Sbjct 538769 TCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCC 538828 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGC-TGTCCCCACCCTCCACCTCCACGGTAATCGT 45303 ||| || ||| | || | || | ||||| ||| ||||| | || ||||| Sbjct 538829 TGAATCTTGGTCTTGA-CGTTGTCAATCGTGTCCGACGACTCGACCTCGAGCGTGATCGT 538887 Query 45304 CTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||||||| || ||||| || ||||||||||| Sbjct 538888 CTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 538920 Score = 102 bits (112), Expect = 6e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || |||||||| ||||| ||||||||| |||||||| || || ||| | || Sbjct 538937 AACACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTGCGGCCATCC 538996 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || || || || ||||| ||||| || |||||||| || || | |||||||||||| Sbjct 538997 TCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCC 539056 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGC-TGTCCCCACCCTCCACCTCCACGGTAATCGT 45303 ||| || ||| | || | || | ||||| ||| ||||| | || || || Sbjct 539057 TGAATCTTGGTCTTGA-CGTTGTCAATCGTGTCCGACGACTCGACCTCGAGCGTGATGGT 539115 Query 45304 CTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||||||| || ||||| || ||||| ||||| Sbjct 539116 CTTGCCCGTAAGCGTCTTAACGAAGATCTGCAT 539148 >seq120 Length=764448 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||||||||| |||||||||||||||||| ||| || ||| | || || Sbjct 228536 ACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAATCGGCGAGCGTGCGGCCATCCTCG 228595 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || ||||| || | || |||||||| || || | ||||| |||||| | Sbjct 228596 AGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCTTTGTCCTGA 228655 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | ||||| ||| ||||| | || ||||||||| Sbjct 228656 ATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTG 228715 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| ||||| || ||||||||||| Sbjct 228716 CCGGTCAGGGTCTTGACGAAGATTTGCAT 228744 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||||||||| |||||||||||||||||| ||| || ||| | || || Sbjct 228308 ACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAATCGGCGAGCGTGCGGCCATCCTCG 228367 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || ||||| || | || |||||||| || || | ||||| |||||| | Sbjct 228368 AGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCTTTGTCCTGA 228427 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | ||||| ||| ||||| | || ||||||||| Sbjct 228428 ATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTG 228487 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| ||||| || ||||| ||||| Sbjct 228488 CCGGTCAGGGTCTTGACGAAGATCTGCAT 228516 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||||||||| |||||| || || ||||| ||| || ||| | || || Sbjct 228080 ACCAAGTGCAGCGTCGACTCCTTTTGGATATTGTAATCGGCGAGCGTGCGGCCATCCTCA 228139 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || ||||| || | || |||||||| || || | ||||| |||||| | Sbjct 228140 AGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCTTTGTCCTGA 228199 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | ||||| ||| ||||| | || ||||||||| Sbjct 228200 ATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTG 228259 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| ||||| || ||||| ||||| Sbjct 228260 CCGGTCAGGGTCTTGACGAAGATCTGCAT 228288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395074126259683