Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900009495.1_202016-12-
23] 223 sequences; 35,405,415 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq107 271 7e-68
seq115 122 8e-23
seq82 109 5e-19
seq120 98.7 9e-16
seq46 95.1 1e-14
>seq107
Length=347312
Score = 271 bits (300), Expect = 7e-68
Identities = 899/1393 (65%), Gaps = 42/1393 (3%)
Strand=Plus/Minus
Query 22502 GATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGC 22561
|| ||| |||| ||||| | || ||| || || |||||| ||||| |||||||||
Sbjct 18657 GAAGTGTACGGCTCGAAGCACTCGTTGAAGCCGAGGATCTGACTCGTCGACGCGGTCGGC 18598
Query 22562 ATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATC 22621
|| ||||| ||| |||||||| | | || ||||||| ||| || |||||||
Sbjct 18597 ATTGGCGCGCACACAAGCGAGTTGCGGAGACCATGCTTTGCAATCTTCTCCTTGAGCTCG 18538
Query 22622 GACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCG 22681
| ||| |||||||||||| ||| |||||| |||||| ||||| |||||| ||||
Sbjct 18537 GTCCAATCCCACAGATCGCTCGGGGTCACAC---CCCACAAGTCGTACTGCAACTCGCCC 18481
Query 22682 CGACTCGCCGGGCTGCCTTCGTACGTTTCGTA---------------CGGA----CCATA 22722
|| ||||| || ||| || ||| ||| |||||
Sbjct 18480 TGAGAAGCCGGAGATCCGGGGTAAGTCGAGTAGTAGCCTGGGTCGCCCGGGTTAGCCATA 18421
Query 22723 TA----TCGCG-GCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAG 22777
||||| || | ||||| || ||| | |||| ||| || || |||||||||
Sbjct 18420 GCAAAGTCGCGTGCCATGTCGCACGACGACTCGATCGCGGCGTGGTAGATGGTCTCGAAG 18361
Query 22778 ATTTTCTTGTTCAATTCG-GCGGC---GGCGACGCTTTCGTACGGCATACGCATCATCAC 22833
|| | |||||| | | | ||| | ||||| ||| ||||||| || ||
Sbjct 18360 ATCTGCTTGTTGAGCTTGCGCGCCTCGGGCGAA----TCGAACGGCATCGCCAAGGCCAT 18305
Query 22834 GAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGATTCGACAC 22893
||||||||| || | ||| || || || || ||||| || |||| | ||| ||
Sbjct 18304 GAACGCGTCGGCGAGACCTTGCACTCCGATGCCGATGGGGCGGTGGCGGAAATTGGAGTT 18245
Query 22894 TTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCAC 22953
| |||||| | |||||| |||| ||||| | | ||||||||| | ||
Sbjct 18244 CTGCGCCTCGATGACAGGATAGTAATTGACGTCGATGATGCGGTTCAAGTTGAAAGCGAC 18185
Query 22954 AATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGATTGTACAACAAACTT 23013
| || | | ||||||||| ||||| || | | || ||
Sbjct 18184 GACCTTGACGACCTCGTGCAACTTTTTAAAGTCGTACACGCCG--TTCTTGATGAAGCTC 18127
Query 23014 GTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTAC 23073
| ||| |||||||||| | ||||| ||||| |||||| | || |||||| |
Sbjct 18126 GGCAACG-CGATCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGTGCCGAGTACTCGAT 18068
Query 23074 AATTTCGGTACATAGATTGCTAC-ACTTTATCGTGCCCAAATTGCTCTGGTT-GCTTTTT 23131
|| ||||| || | || | || |||| ||||| || | || | ||||| | ||| |
Sbjct 18067 GATCTCGGTGCACAAGTT-CGACGACTTGATCGTCCCAAGGTTCTTTTGGTTTGATTTCT 18009
Query 23132 CGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATG 23191
| | || | ||||||||||||||| | || |||| || |||||||| | |||||
Sbjct 18008 TGTTCGCG-GCGTCCTTGTAGAGCATGAAGGGGTTGCCAGTTTCGACCTGGGCCTCGAGA 17950
Query 23192 ATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTACCTGCCTTCTTCCTCGTAC 23251
|| || ||| | | || ||| | | | | | | ||| || | |||||
Sbjct 17949 ATTGCGTACCAAAGCTTTTGCGCGGGGATCGTTTTCTTGGCGCGGCCCTCCTTTTCGTAT 17890
Query 23252 TTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATC 23311
|| | | |||| ||| || || | || || ||| |||||||| | ||
Sbjct 17889 TTCTCGAACAAGGCGCGGAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGGCTTCGGCG 17830
Query 23312 GGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATC 23371
|| || | |||| |||| | | || || || ||| || ||||| || |||
Sbjct 17829 GGGCAGAAGAGAGGCCACTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATC 17770
Query 23372 CATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAA 23431
|| || || |||| || || || ||||| || ||||| |||||| ||||| |
Sbjct 17769 CAGAGCGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGATTCTTGCGAAGG 17710
Query 23432 TCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGT 23491
|||| || || || ||||| || ||||||||||||||||| | || || || || ||
Sbjct 17709 TCCAGGAACTCAAAGACGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGA 17650
Query 23492 CTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGC 23551
| ||| ||||| || || |||||||| || |||||||||||||| || | ||||| ||
Sbjct 17649 CGCTTGTTGCCACCTTGGTCGACGTAGCGCGCCGTGTTGTTGTAGACACGGAGCATGGGG 17590
Query 23552 ACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTG 23611
|||| ||||| || |||| ||| || | || || |||| || | ||||
Sbjct 17589 ACGATGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTAGGAGCCGGTTGCGCGGATGTTG 17530
Query 23612 TGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTG 23671
|| | | ||||| || || ||| | | || || || | |||||| || || |||
Sbjct 17529 TGGATGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTG 17470
Query 23672 TCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGC 23731
||||| ||||| || || || || || ||| ||||| |||||| || || | |||
Sbjct 17469 TCGTAAATGCCTTCAATCGAATCATCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGC 17410
Query 23732 GCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGAC 23791
| | ||||| |||| ||| || ||||| |||||| |||||||| | | |||
Sbjct 17409 GGGTGAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGAC 17350
Query 23792 ATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACG 23851
|| || ||||| | | | | || |||||||| | ||||| || |||| ||||||
Sbjct 17349 ATGAGGTTGTAAGACTGCAAGACGCGCTCAATGTCGTGACCGTGGATGCCGACGGCGACA 17290
Query 23852 CGCATCATCATGT 23864
||||| | |||||
Sbjct 17289 CGCATGAGCATGT 17277
>seq115
Length=605796
Score = 122 bits (134), Expect = 8e-23
Identities = 172/239 (72%), Gaps = 6/239 (3%)
Strand=Plus/Plus
Query 31194 TGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCG 31253
||||||| || || ||||| || || ||||| || |||||| |||| || || ||||||
Sbjct 306077 TGCAAATCTTTGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 306136
Query 31254 ACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
||| |||| | ||||| || ||| | |||||||||||| | ||||| ||||||
Sbjct 306137 ACACGATCGACAACGTCAAGACCAAGA-TCCAAGACAAGGAAGGCATCCCGCCAGACCAG 306195
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| ||||| || ||||| ||||| ||| | || || || || ||| || |||
Sbjct 306196 CAACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAAC 306255
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT----AGAAGCG 31427
|| |||||||| |||||||| || |||| || | ||| | || ||| |||||||
Sbjct 306256 ATCCAAAAAGAGTCGACTCTCCACTTGGTGCTCCGCCTGCGTGGTGGTGCCAAGAAGCG 306314
>seq82
Length=702097
Score = 109 bits (120), Expect = 5e-19
Identities = 154/214 (72%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|| |||||| || || |||||||| || ||||| ||||||||| |||| || || ||||
Sbjct 523001 CAGGCAAATCTTTGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTC 522942
Query 31252 CGACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310
||||| |||| | ||||| || ||| | |||||||||||| | ||||| ||||
Sbjct 522941 CGACACGATCGACAACGTCAAGACCAAGA-TCCAAGACAAGGAAGGCATCCCGCCAGACC 522883
Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370
|||| ||||| || || || ||||| ||| | || || || || ||| || |
Sbjct 522882 AGCAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACA 522823
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|||| ||||| || || || || || |||| ||
Sbjct 522822 ACATCCAAAAGGAGTCCACCCTCCACTTGGTCCT 522789
>seq120
Length=764448
Score = 98.7 bits (108), Expect = 9e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| ||||| ||||| ||||| |||||||| |||| || || | ||
Sbjct 228744 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 228685
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| | || |||||| || ||| | || || |||||
Sbjct 228684 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAAGAGGGCATTCCCCCAGACCAA 228625
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| ||||| || ||||||||||| ||| | || || || | |||||| |||
Sbjct 228624 CAACGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAAC 228565
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||||| || || ||||| || || |||| ||
Sbjct 228564 ATTCAGAAGGAGTCGACGCTGCACTTGGTGCT 228533
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| ||||| ||||| |||||||| |||| || || | ||
Sbjct 228516 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 228457
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| | || |||||| || ||| | || || |||||
Sbjct 228456 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAAGAGGGCATTCCCCCAGACCAA 228397
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| ||||| || ||||||||||| ||| | || || || | |||||| |||
Sbjct 228396 CAACGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAAC 228337
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||||| || || ||||| || || |||| ||
Sbjct 228336 ATTCAGAAGGAGTCGACGCTGCACTTGGTGCT 228305
Score = 89.7 bits (98), Expect = 5e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| ||||| ||||| |||||||| |||| || || | ||
Sbjct 228288 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 228229
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| | || |||||| || ||| | || || |||||
Sbjct 228228 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAAGAGGGCATTCCCCCAGACCAA 228169
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| ||||| || ||||||||||| ||| | || || || | |||||| ||
Sbjct 228168 CAACGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACGCTCGCCGATTACAAT 228109
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|| ||||| || ||||| || || |||| ||
Sbjct 228108 ATCCAAAAGGAGTCGACGCTGCACTTGGTGCT 228077
>seq46
Length=591722
Score = 95.1 bits (104), Expect = 1e-14
Identities = 116/156 (74%), Gaps = 2/156 (1%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| ||||| || || ||||| |||||||| |||| || ||| | ||
Sbjct 538692 ATGCAAATTTTCGTCAAGACGCTTACGGGCAAGACGATCACGCTCGAGGTCGAATCCTCG 538633
Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | || | ||||| || || || |||||||| ||| | || || |||||
Sbjct 538632 GACACGATTGACAACGTCAAGACCAAG-ATCCAAGACAAGGAGGGCATTCCCCCAGACCA 538574
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
|| ||||| || ||||||||||| ||| | || ||
Sbjct 538573 ACAACGTCTCATCTTCGCTGGCAAGCAGCTCGAGGA 538538
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| ||||| || || ||||| |||||||| |||| || || ||||
Sbjct 538920 ATGCAAATCTTCGTCAAGACGCTTACGGGCAAGACGATCACGCTCGAGGTCGAGTCGTCG 538861
Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | || | ||||| || ||| | ||||||||| ||| | || || |||||
Sbjct 538860 GACACGATTGACAACGTCAAGACCAAGATTCA-GGACAAGGAGGGCATTCCCCCAGACCA 538802
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|| || | || ||||||||||| ||| | || || || | ||||| ||
Sbjct 538801 ACAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAA 538742
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGT 31401
||| || || || ||||| ||||| ||||
Sbjct 538741 CATCCAGAAGGAGTCGACGCTTCACTTGGT 538712
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445765157426160
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