Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900009495.1_202016-12-
23] 223 sequences; 35,405,415 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq107 206 7e-48
>seq107
Length=347312
Score = 206 bits (228), Expect = 7e-48
Identities = 573/869 (66%), Gaps = 10/869 (1%)
Strand=Plus/Plus
Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507
|||||||||||||| ||| | |||||||| || | || ||||| | | || ||||
Sbjct 17264 GAACGCCCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGACATTGAG 17323
Query 363508 GCCGCGA-TTGAAA-CATATAAGCTTCTAAGTGCTCGTG-TA-TTCACGCACGCCACGCC 363563
|||| ||| | | || || || | || | | | || || || |||||| ||||
Sbjct 17324 --CGCGTCTTGCAGTCTTACAACCTCAT--GTCCGAGCGCTACTTTACCCACGCCTCGCC 17379
Query 363564 AACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAAT 363623
|| | | ||| || ||||| | | | || ||| | || || || || || | | ||
Sbjct 17380 GACGCTCTTCAACGCCGGAACGCCTCACCCGCAGCTTTCGTCCTGTTTCCTGGTCACGAT 17439
Query 363624 GAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAA 363683
|||||| ||||| || || || || | ||||| || |||| || || || || |||||
Sbjct 17440 GAAGGATGATTCGATTGAAGGCATTTACGACACGCTCAAGACGTGCGCGCTCATCTCCAA 17499
Query 363684 GAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCG 363743
|| || || || || ||| | |||||||| | || ||| | |||||
Sbjct 17500 GACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGCAACCGGCTCCTACATCGC 17559
Query 363744 CGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803
|||||| || |||||||| || | || |||||||| ||||| | |||| || ||
Sbjct 17560 CGGCACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACACGGC 17619
Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863
| | ||||||||||| ||||| ||||| || || || || || || ||||||||
Sbjct 17620 GCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCC 17679
Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA-AAACACGGGAAAAGAGGAAT 363922
|| || || | |||||||| || || || || || || ||| || || ||||||
Sbjct 17680 GTGGCACGCTGACGTCTTTGAGTTCCTGGACCTTCGCAAGAATCAC-GGCAAGGAGGAAG 17738
Query 363923 TGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGG 363982
| || || |||||||| |||| ||| || ||| || | || | || ||| |||| || |
Sbjct 17739 TCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTCTTCATGGAGCGTGTCG 17798
Query 363983 AGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTAT 364042
|||| | | ||| | ||||| ||||| |||| || || || ||| || |
Sbjct 17799 AGGCCGCCGGCGAGTGGCCTCTCTTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTCT 17858
Query 364043 GGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGA 364102
|| || || | || | | ||| || || ||| |||||| || || |
Sbjct 17859 ATGGCGAAGAGTTCCGCGCCTTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAAA 17918
Query 364103 CAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACAC 364162
| || ||||| || ||||| |||| || || | || | ||| | || || || | |
Sbjct 17919 CGATCCCCGCGCAAAAGCTTTGGTACGCAATTCTCGAGGCCCAGGTCGAAACTGGCAACC 17978
Query 364163 CCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAA 364222
||| ||| | ||||| || | ||| || || ||||| || ||||||| || |
Sbjct 17979 CCTTCATGCTCTACAAGGACGCCGCGAACAAGAAATCAAACCAAAAGAACCTTGGGACGA 18038
Query 364223 TTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCG 364282
| || | ||| | || |||||||| || || ||| | || || |||||| ||||
Sbjct 18039 TCAAGTCGTCGAACTTGTGCACCGAGATCATCGAGTACTCGGCACCGGACGAGTGCGCCG 18098
Query 364283 TATGTAACCTTGCGTCGATCGCGCTTCCG 364311
| || ||| | || ||||||||| | |||
Sbjct 18099 TCTGCAACTTGGCCTCGATCGCGTTGCCG 18127
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303349876074386
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |