Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900009495.1_202016-12-
23] 223 sequences; 35,405,415 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq115 132 5e-26
seq82 127 2e-24
seq120 125 7e-24
seq46 113 4e-20
seq135 86.0 6e-12
>seq115
Length=605796
Score = 132 bits (146), Expect = 5e-26
Identities = 165/226 (73%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| || ||||| || || | |||||||| ||||| |||||||| ||| |
Sbjct 306302 CCACCACGCAGGCGGAGCACCAAGTGGAGAGTCGACTCTTTTTGGATGTTGTAGTCGGCC 306243
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| ||||||||||| ||| |||| | ||| |||||||| || |||
Sbjct 306242 AAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGG 306183
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| ||| || ||||| | || | || |||| |||||||
Sbjct 306182 ATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 306123
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCA 131233
|||| ||| | ||| || || || || || || || || || ||||
Sbjct 306122 TCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAAGATTTGCA 306077
>seq82
Length=702097
Score = 127 bits (140), Expect = 2e-24
Identities = 170/235 (72%), Gaps = 1/235 (0%)
Strand=Plus/Plus
Query 131003 ATGA-GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAA 131061
|||| |||||| || | || || || || || | ||| ||||||||||| ||||||||
Sbjct 522768 ATGATGCCACCTCGGAGGCGGAGGACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAG 522827
Query 131062 TCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCC 131121
||| || |||||| ||||| ||||||||||| || |||| | ||| ||||||||
Sbjct 522828 TCGGCCAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCT 522887
Query 131122 GGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGAC 131181
|| ||||| ||||| ||||| ||| || ||||| | || | || |||| |||
Sbjct 522888 GGCGGGATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGAC 522947
Query 131182 TCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236
|||| |||| ||| | || || || || ||||| || || || || ||| |||
Sbjct 522948 TCGACCTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACAAAGATTTGCCTGA 523002
>seq120
Length=764448
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| ||||| || || | ||||||||||| |||||||||||||||
Sbjct 228290 CCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAATCGGCG 228349
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| ||||||||||| ||| |||| | ||| || ||||| || ||
Sbjct 228350 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGA 228409
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || |||||||| || || ||||| | || | || || | ||||||||
Sbjct 228410 ATGCCCTCTTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 228469
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| || | || || ||||| || || || ||||| ||||||||
Sbjct 228470 TCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 228516
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| ||||| || || | ||||||||||| |||||||||||||||
Sbjct 228518 CCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAATCGGCG 228577
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| ||||||||||| ||| |||| | ||| || ||||| || ||
Sbjct 228578 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGA 228637
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || |||||||| || || ||||| | || | || || | ||||||||
Sbjct 228638 ATGCCCTCTTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 228697
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| || | || || ||||| || || || ||||| || |||||
Sbjct 228698 TCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 228744
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || || | ||| ||||| || || | |||||||||||||| || |||||||||
Sbjct 228062 CCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTTTGGATATTGTAATCGGCG 228121
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| ||||||||||| ||| |||| | ||| || ||||| || ||
Sbjct 228122 AGCGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGA 228181
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || |||||||| || || ||||| | || | || || | ||||||||
Sbjct 228182 ATGCCCTCTTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 228241
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| || | || || ||||| || || || ||||| ||||||||
Sbjct 228242 TCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 228288
>seq46
Length=591722
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||| | ||||| ||| || || | ||||||||||| || |||||||||||
Sbjct 538922 CCACCGCGGAGACGCAACACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGCG 538981
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| ||||||||||| ||| |||| || || || ||||| || ||
Sbjct 538982 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCTGGGGGA 539041
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || || ||||| | || | || || | |||||||
Sbjct 539042 ATGCCCTCCTTGTCCTGAATCTTGGTCTTGACGTTGTCAATCGTGTCCGACGACTCGACC 539101
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| || | ||| || || || || || || ||||| ||||||||
Sbjct 539102 TCGAGCGTGATGGTCTTGCCCGTAAGCGTCTTAACGAAGATCTGCAT 539148
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || || | ||||||||| || || | ||||||||||| || |||||||||||
Sbjct 538466 CCCCCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGCG 538525
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| ||||||||||| ||| |||| | ||| || ||||| || ||
Sbjct 538526 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGA 538585
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | || || | ||| ||||
Sbjct 538586 ATGCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCAATCGTGTCCGAGGATTCGACC 538645
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| || | || || || || || || || |||||||| |||||
Sbjct 538646 TCGAGCGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAAATTTGCAT 538692
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||| | ||||| ||| || || | ||||||||||| || |||||||||||
Sbjct 538694 CCACCGCGGAGACGCAACACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAATCCGCG 538753
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| ||||||||||| ||| |||| || || || ||||| || ||
Sbjct 538754 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCTGGGGGA 538813
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || || ||||| | || | || || | |||||||
Sbjct 538814 ATGCCCTCCTTGTCCTGAATCTTGGTCTTGACGTTGTCAATCGTGTCCGACGACTCGACC 538873
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| || | || || || || || || || ||||| || |||||
Sbjct 538874 TCGAGCGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 538920
>seq135
Length=558922
Score = 86.0 bits (94), Expect = 6e-12
Identities = 154/220 (70%), Gaps = 5/220 (2%)
Strand=Plus/Plus
Query 46234 GGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAGGGCCTGCAT 46293
||| | |||||||| |||| || ||||||||| || ||||| ||||||||||| ||
Sbjct 88574 GGCTTAATGCCCGGATTGACCTTCTCCAACGAGCTCATCTCGCGTGACGAGGGCCTCCAC 88633
Query 46294 ACGGACTTTGCGTGTCTC-TACTATAACACTCGCGTGCACGACAAGCTTGCGCCCGACAC 46352
|| |||||||| || ||| | | | ||| | || | ||| | || | ||||||||
Sbjct 88634 ACCGACTTTGCTTGCCTCTTGTTCTCCCAC-CTCGAG--CGAAGACCTCAC-CCCGACAC 88689
Query 46353 CGTGCTGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACT 46412
||| | ||| |||||||||| || | ||||||||||| || || || | || ||
Sbjct 88690 CGTCGCGCTCATCATCAAGGAGGCCGTCGAAATTGAGAAGGAATTCTTGACCGAGGCTCT 88749
Query 46413 GCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGC 46452
||| | || | |||||||| || || ||||||
Sbjct 88750 TCCCTGCGGTTTGATCGGCATGAATGCCAAGCTCATGTGC 88789
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472011484264320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |