Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900009495.1_202016-12- 23] 223 sequences; 35,405,415 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq115 132 5e-26 seq82 127 2e-24 seq120 125 7e-24 seq46 113 4e-20 seq135 86.0 6e-12 >seq115 Length=605796 Score = 132 bits (146), Expect = 5e-26 Identities = 165/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || ||||| || || | |||||||| ||||| |||||||| ||| | Sbjct 306302 CCACCACGCAGGCGGAGCACCAAGTGGAGAGTCGACTCTTTTTGGATGTTGTAGTCGGCC 306243 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| ||| |||| | ||| |||||||| || ||| Sbjct 306242 AAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGG 306183 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||||| | || | || |||| ||||||| Sbjct 306182 ATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 306123 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCA 131233 |||| ||| | ||| || || || || || || || || || |||| Sbjct 306122 TCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAAGATTTGCA 306077 >seq82 Length=702097 Score = 127 bits (140), Expect = 2e-24 Identities = 170/235 (72%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 131003 ATGA-GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAA 131061 |||| |||||| || | || || || || || | ||| ||||||||||| |||||||| Sbjct 522768 ATGATGCCACCTCGGAGGCGGAGGACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAG 522827 Query 131062 TCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCC 131121 ||| || |||||| ||||| ||||||||||| || |||| | ||| |||||||| Sbjct 522828 TCGGCCAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCT 522887 Query 131122 GGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGAC 131181 || ||||| ||||| ||||| ||| || ||||| | || | || |||| ||| Sbjct 522888 GGCGGGATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGAC 522947 Query 131182 TCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 |||| |||| ||| | || || || || ||||| || || || || ||| ||| Sbjct 522948 TCGACCTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACAAAGATTTGCCTGA 523002 >seq120 Length=764448 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| || || | ||||||||||| ||||||||||||||| Sbjct 228290 CCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAATCGGCG 228349 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| |||| | ||| || ||||| || || Sbjct 228350 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGA 228409 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || |||||||| || || ||||| | || | || || | |||||||| Sbjct 228410 ATGCCCTCTTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 228469 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || ||||| || || || ||||| |||||||| Sbjct 228470 TCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 228516 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| || || | ||||||||||| ||||||||||||||| Sbjct 228518 CCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAATCGGCG 228577 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| |||| | ||| || ||||| || || Sbjct 228578 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGA 228637 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || |||||||| || || ||||| | || | || || | |||||||| Sbjct 228638 ATGCCCTCTTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 228697 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || ||||| || || || ||||| || ||||| Sbjct 228698 TCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 228744 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| ||||| || || | |||||||||||||| || ||||||||| Sbjct 228062 CCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTTTGGATATTGTAATCGGCG 228121 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| |||| | ||| || ||||| || || Sbjct 228122 AGCGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGA 228181 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || |||||||| || || ||||| | || | || || | |||||||| Sbjct 228182 ATGCCCTCTTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 228241 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || ||||| || || || ||||| |||||||| Sbjct 228242 TCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 228288 >seq46 Length=591722 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||||| ||| || || | ||||||||||| || ||||||||||| Sbjct 538922 CCACCGCGGAGACGCAACACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGCG 538981 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| |||| || || || ||||| || || Sbjct 538982 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCTGGGGGA 539041 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||||| | || | || || | ||||||| Sbjct 539042 ATGCCCTCCTTGTCCTGAATCTTGGTCTTGACGTTGTCAATCGTGTCCGACGACTCGACC 539101 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || || || || || || ||||| |||||||| Sbjct 539102 TCGAGCGTGATGGTCTTGCCCGTAAGCGTCTTAACGAAGATCTGCAT 539148 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||||||||| || || | ||||||||||| || ||||||||||| Sbjct 538466 CCCCCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGCG 538525 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| |||| | ||| || ||||| || || Sbjct 538526 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGA 538585 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || | ||| |||| Sbjct 538586 ATGCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCAATCGTGTCCGAGGATTCGACC 538645 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || || || || || || |||||||| ||||| Sbjct 538646 TCGAGCGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAAATTTGCAT 538692 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||||| ||| || || | ||||||||||| || ||||||||||| Sbjct 538694 CCACCGCGGAGACGCAACACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAATCCGCG 538753 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| |||| || || || ||||| || || Sbjct 538754 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCTGGGGGA 538813 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||||| | || | || || | ||||||| Sbjct 538814 ATGCCCTCCTTGTCCTGAATCTTGGTCTTGACGTTGTCAATCGTGTCCGACGACTCGACC 538873 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || || || || || || ||||| || ||||| Sbjct 538874 TCGAGCGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 538920 >seq135 Length=558922 Score = 86.0 bits (94), Expect = 6e-12 Identities = 154/220 (70%), Gaps = 5/220 (2%) Strand=Plus/Plus Query 46234 GGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAGGGCCTGCAT 46293 ||| | |||||||| |||| || ||||||||| || ||||| ||||||||||| || Sbjct 88574 GGCTTAATGCCCGGATTGACCTTCTCCAACGAGCTCATCTCGCGTGACGAGGGCCTCCAC 88633 Query 46294 ACGGACTTTGCGTGTCTC-TACTATAACACTCGCGTGCACGACAAGCTTGCGCCCGACAC 46352 || |||||||| || ||| | | | ||| | || | ||| | || | |||||||| Sbjct 88634 ACCGACTTTGCTTGCCTCTTGTTCTCCCAC-CTCGAG--CGAAGACCTCAC-CCCGACAC 88689 Query 46353 CGTGCTGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACT 46412 ||| | ||| |||||||||| || | ||||||||||| || || || | || || Sbjct 88690 CGTCGCGCTCATCATCAAGGAGGCCGTCGAAATTGAGAAGGAATTCTTGACCGAGGCTCT 88749 Query 46413 GCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGC 46452 ||| | || | |||||||| || || |||||| Sbjct 88750 TCCCTGCGGTTTGATCGGCATGAATGCCAAGCTCATGTGC 88789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472011484264320