Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900009495.1_202016-12- 23] 223 sequences; 35,405,415 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq107 358 1e-93 seq135 127 4e-24 >seq107 Length=347312 Score = 358 bits (396), Expect = 1e-93 Identities = 847/1265 (67%), Gaps = 32/1265 (3%) Strand=Plus/Minus Query 244391 TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCG 244450 |||| ||||||| ||||||||||||||||||| |||||| | | ||| |||| | Sbjct 18390 TCGATCGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTTGCGCGCCTCGGGC 18331 Query 244451 CAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCG 244510 | ||| || || ||| |||||| ||||||| || || ||||| ||||||||| Sbjct 18330 GAATCGAACGGCATCGCCAAGGCCATGAACGCGTCGGCGAGACCTTGCACTCCGATGCCG 18271 Query 244511 ATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCG 244570 ||||| | ||| || |||||| | || ||| || || || | ||| ||||| Sbjct 18270 ATGGGGCGGTGGCGGAAATTGGAGTTCTGCGCCTCGATGACAGGATAGTAATTGACGTCG 18211 Query 244571 ATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCG 244630 || | ||| | |||| | || | |||||| ||| || | | ||||||| Sbjct 18210 ATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGTGCAACTTTTTAAAGTCG 18151 Query 244631 TACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCC 244690 ||| || | | || || ||| ||| ||| || | ||| |||| Sbjct 18150 TACACGCCG---TTCT------TGATGAAGCTCGGCAACGCGAT-----CGA----GGCC 18109 Query 244691 AGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTA 244750 | |||||||||||| ||| |||| | ||||| || ||||||||||| | ||| Sbjct 18108 AAGTTGCAGACGGCGCACTCGTCCGGTGCCGAGTACTCGATGATCTCGGTGCACAAGTTC 18049 Query 244751 CTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAG 244810 ||||||| || || |||| || || || || || ||| ||||||||||||| Sbjct 18048 GACGACTTGATCGTCCCAAGGTTCTTTTGGTTTGATTTCTTGTTCGCGGCGTCCTTGTAG 17989 Query 244811 AGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTA 244870 ||||||||||| || || |||| |||||| |||| | || ||| || | Sbjct 17988 AGCATGAAGGGGTTGCCAGTTTCGACCTGGGCCTCGAGAATTGCGTACCAAAGCTTTTGC 17929 Query 244871 GCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAAC 244930 || || ||| | || |||||| ||||| | ||| ||| |||| Sbjct 17928 GCGGGGATCGTTTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAACAAGGCGCGGAAC 17869 Query 244931 TCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCG 244990 || ||| |||| |||| ||||||||| || ||||| | |||| ||||||| Sbjct 17868 TCTTCGCCATAGACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAAGAGAGGCCACTCG 17809 Query 244991 CCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCC 245050 ||| || ||| ||| | || ||||||||| ||||| |||||||| || |||||| || Sbjct 17808 CCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGCGCAAAGAAGAGATCA 17749 Query 245051 CTGGTCCTCTGCTCGTCCGAGCCAGTG-TTCTTCCTCAGCTCCAAAAAGTCAAAGACGTC 245109 | | | || ||| ||| ||| ||||| | || |||| || ||||||||||| Sbjct 17748 CGAGCGCGGACTTCCTCCTTGCC-GTGATTCTTGCGAAGGTCCAGGAACTCAAAGACGTC 17690 Query 245110 GACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTC 245169 ||||||| ||||| | ||||| |||| ||| ||||| ||||||||||| || ||||| Sbjct 17689 AGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTC 17630 Query 245170 CACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCC 245229 || | | | |||| ||| || || | || || |||||||| |||| ||| Sbjct 17629 GACGTAGCGCGCCGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCC 17570 Query 245230 GTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCC 245289 ||| ||||| |||||||| ||| | | | || |||| |||| || || | || Sbjct 17569 GTTCGTGCCGGCGATGTAGGAGCCGGTTGCGCGGATGTTGTGGATGCTCAAACCGATACC 17510 Query 245290 GCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCT 245349 |||||| |||||||||||| ||||| |||||| ||||| ||||| || || Sbjct 17509 ACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAAATGCCTTCAATCGA 17450 Query 245350 GTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTT 245409 || |||||| ||| ||| || ||||| || ||||| || | || | | | ||| Sbjct 17449 ATCATCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTT 17390 Query 245410 GAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTC-GAGAGGAACCCGTACGTCTGGA 245468 ||| || || || ||||||||||||||||| |||| || | || ||| | ||| | Sbjct 17389 GAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGC-GCTCGGACATGAGGTTGTAAGACTGCA 17331 Query 245469 GCAGA-GCG-TCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCTG 245526 ||| ||| || |||| || |||||||| | |||| | |||||| ||||||| Sbjct 17330 --AGACGCGCTCAATGTCGTGACCGTGGATGCCGACGGCGACACGCATGAGCATGTGCTG 17273 Query 245527 -GGGCGTCTCGATGGGTCCCTCGGGTCCCT--TGAGCATGTAGGAGCGCTCGAGCGTCTT 245583 |||||| ||| | | || | ||| | |||| |||||||||||||||||| || Sbjct 17272 CGGGCGT-TCG--GCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCGAGCGTTTT 17216 Query 245584 GAACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGGCTGCGTCGAGTCTCTC 245643 ||| |||||||| |||||| || ||| || || | ||||| || ||| | || Sbjct 17215 GAAGCCAAAGTAATTGTAGCCGAAATCGCGGTCGTAGATAACGGCGCTGTTGAGGCGGTC 17156 Query 245644 GGCGT 245648 ||||| Sbjct 17155 GGCGT 17151 >seq135 Length=558922 Score = 127 bits (140), Expect = 4e-24 Identities = 186/260 (72%), Gaps = 5/260 (2%) Strand=Plus/Plus Query 42744 GGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTC 42803 ||| | ||||| |||||||||||||||||| || | | ||||||||| | |||||| Sbjct 88538 GGCTCGTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGCTTAATGCCCGGATTGACCTTC 88597 Query 42804 TCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTC 42863 || ||||| |||||| | |||||||| || || | |||||||| |||||| ||||| Sbjct 88598 TCCAACGAGCTCATCTCGCGTGACGAGGGCCTCCACACCGACTTTGCTTGCCTCTTGTTC 88657 Query 42864 TCGAGCCACCTCAGGCACAAGCCCTC-GAAGGAGCGGGTCCGGGCCATCATCACGGAGGC 42922 || ||||||| || ||| |||| || ||| | |||||||| |||||| Sbjct 88658 TC---CCACCTCGAGC-GAAGACCTCACCCCGACACCGTCGCGCTCATCATCAAGGAGGC 88713 Query 42923 CGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAA 42982 ||| || || |||||||| ||| | || || | || ||| || |||||||||| Sbjct 88714 CGTCGAAATTGAGAAGGAATTCTTGACCGAGGCTCTTCCCTGCGGTTTGATCGGCATGAA 88773 Query 42983 CCACGACCTCATGTGCAAGT 43002 | | ||||||||| ||| Sbjct 88774 TGCCAAGCTCATGTGCCAGT 88793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944336567654480