Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900009495.1_202016-12-
23] 223 sequences; 35,405,415 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq107 358 1e-93
seq135 127 4e-24
>seq107
Length=347312
Score = 358 bits (396), Expect = 1e-93
Identities = 847/1265 (67%), Gaps = 32/1265 (3%)
Strand=Plus/Minus
Query 244391 TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCG 244450
|||| ||||||| ||||||||||||||||||| |||||| | | ||| |||| |
Sbjct 18390 TCGATCGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTTGCGCGCCTCGGGC 18331
Query 244451 CAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCG 244510
| ||| || || ||| |||||| ||||||| || || ||||| |||||||||
Sbjct 18330 GAATCGAACGGCATCGCCAAGGCCATGAACGCGTCGGCGAGACCTTGCACTCCGATGCCG 18271
Query 244511 ATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCG 244570
||||| | ||| || |||||| | || ||| || || || | ||| |||||
Sbjct 18270 ATGGGGCGGTGGCGGAAATTGGAGTTCTGCGCCTCGATGACAGGATAGTAATTGACGTCG 18211
Query 244571 ATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCG 244630
|| | ||| | |||| | || | |||||| ||| || | | |||||||
Sbjct 18210 ATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGTGCAACTTTTTAAAGTCG 18151
Query 244631 TACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCC 244690
||| || | | || || ||| ||| ||| || | ||| ||||
Sbjct 18150 TACACGCCG---TTCT------TGATGAAGCTCGGCAACGCGAT-----CGA----GGCC 18109
Query 244691 AGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTA 244750
| |||||||||||| ||| |||| | ||||| || ||||||||||| | |||
Sbjct 18108 AAGTTGCAGACGGCGCACTCGTCCGGTGCCGAGTACTCGATGATCTCGGTGCACAAGTTC 18049
Query 244751 CTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAG 244810
||||||| || || |||| || || || || || ||| |||||||||||||
Sbjct 18048 GACGACTTGATCGTCCCAAGGTTCTTTTGGTTTGATTTCTTGTTCGCGGCGTCCTTGTAG 17989
Query 244811 AGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTA 244870
||||||||||| || || |||| |||||| |||| | || ||| || |
Sbjct 17988 AGCATGAAGGGGTTGCCAGTTTCGACCTGGGCCTCGAGAATTGCGTACCAAAGCTTTTGC 17929
Query 244871 GCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAAC 244930
|| || ||| | || |||||| ||||| | ||| ||| ||||
Sbjct 17928 GCGGGGATCGTTTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAACAAGGCGCGGAAC 17869
Query 244931 TCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCG 244990
|| ||| |||| |||| ||||||||| || ||||| | |||| |||||||
Sbjct 17868 TCTTCGCCATAGACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAAGAGAGGCCACTCG 17809
Query 244991 CCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCC 245050
||| || ||| ||| | || ||||||||| ||||| |||||||| || |||||| ||
Sbjct 17808 CCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGCGCAAAGAAGAGATCA 17749
Query 245051 CTGGTCCTCTGCTCGTCCGAGCCAGTG-TTCTTCCTCAGCTCCAAAAAGTCAAAGACGTC 245109
| | | || ||| ||| ||| ||||| | || |||| || |||||||||||
Sbjct 17748 CGAGCGCGGACTTCCTCCTTGCC-GTGATTCTTGCGAAGGTCCAGGAACTCAAAGACGTC 17690
Query 245110 GACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTC 245169
||||||| ||||| | ||||| |||| ||| ||||| ||||||||||| || |||||
Sbjct 17689 AGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTC 17630
Query 245170 CACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCC 245229
|| | | | |||| ||| || || | || || |||||||| |||| |||
Sbjct 17629 GACGTAGCGCGCCGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCC 17570
Query 245230 GTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCC 245289
||| ||||| |||||||| ||| | | | || |||| |||| || || | ||
Sbjct 17569 GTTCGTGCCGGCGATGTAGGAGCCGGTTGCGCGGATGTTGTGGATGCTCAAACCGATACC 17510
Query 245290 GCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCT 245349
|||||| |||||||||||| ||||| |||||| ||||| ||||| || ||
Sbjct 17509 ACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAAATGCCTTCAATCGA 17450
Query 245350 GTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTT 245409
|| |||||| ||| ||| || ||||| || ||||| || | || | | | |||
Sbjct 17449 ATCATCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTT 17390
Query 245410 GAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTC-GAGAGGAACCCGTACGTCTGGA 245468
||| || || || ||||||||||||||||| |||| || | || ||| | ||| |
Sbjct 17389 GAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGC-GCTCGGACATGAGGTTGTAAGACTGCA 17331
Query 245469 GCAGA-GCG-TCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCTG 245526
||| ||| || |||| || |||||||| | |||| | |||||| |||||||
Sbjct 17330 --AGACGCGCTCAATGTCGTGACCGTGGATGCCGACGGCGACACGCATGAGCATGTGCTG 17273
Query 245527 -GGGCGTCTCGATGGGTCCCTCGGGTCCCT--TGAGCATGTAGGAGCGCTCGAGCGTCTT 245583
|||||| ||| | | || | ||| | |||| |||||||||||||||||| ||
Sbjct 17272 CGGGCGT-TCG--GCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCGAGCGTTTT 17216
Query 245584 GAACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGGCTGCGTCGAGTCTCTC 245643
||| |||||||| |||||| || ||| || || | ||||| || ||| | ||
Sbjct 17215 GAAGCCAAAGTAATTGTAGCCGAAATCGCGGTCGTAGATAACGGCGCTGTTGAGGCGGTC 17156
Query 245644 GGCGT 245648
|||||
Sbjct 17155 GGCGT 17151
>seq135
Length=558922
Score = 127 bits (140), Expect = 4e-24
Identities = 186/260 (72%), Gaps = 5/260 (2%)
Strand=Plus/Plus
Query 42744 GGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTC 42803
||| | ||||| |||||||||||||||||| || | | ||||||||| | ||||||
Sbjct 88538 GGCTCGTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGCTTAATGCCCGGATTGACCTTC 88597
Query 42804 TCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTC 42863
|| ||||| |||||| | |||||||| || || | |||||||| |||||| |||||
Sbjct 88598 TCCAACGAGCTCATCTCGCGTGACGAGGGCCTCCACACCGACTTTGCTTGCCTCTTGTTC 88657
Query 42864 TCGAGCCACCTCAGGCACAAGCCCTC-GAAGGAGCGGGTCCGGGCCATCATCACGGAGGC 42922
|| ||||||| || ||| |||| || ||| | |||||||| ||||||
Sbjct 88658 TC---CCACCTCGAGC-GAAGACCTCACCCCGACACCGTCGCGCTCATCATCAAGGAGGC 88713
Query 42923 CGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAA 42982
||| || || |||||||| ||| | || || | || ||| || ||||||||||
Sbjct 88714 CGTCGAAATTGAGAAGGAATTCTTGACCGAGGCTCTTCCCTGCGGTTTGATCGGCATGAA 88773
Query 42983 CCACGACCTCATGTGCAAGT 43002
| | ||||||||| |||
Sbjct 88774 TGCCAAGCTCATGTGCCAGT 88793
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944336567654480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |