Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900009495.1_202016-12-
23] 223 sequences; 35,405,415 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq107 201 1e-46
seq111 120 4e-22
seq66 104 3e-17
seq135 84.2 3e-11
>seq107
Length=347312
Score = 201 bits (222), Expect = 1e-46
Identities = 557/847 (66%), Gaps = 9/847 (1%)
Strand=Plus/Minus
Query 114470 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 114529
||||| || |||| || || || | | ||| ||| | | |||||| || || ||
Sbjct 18120 GCGATCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGTGCCGAGTACTCGATGATCTCG 18061
Query 114530 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 114589
|| ||||| || || ||| || || || | ||||||||| ||||| || ||||
Sbjct 18060 GTGCACAAGTTCGACGACTTGATCGTCCCAAGGTTCTTTTGGTTTGATTTCTTGTTCGCG 18001
Query 114590 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 114649
|| |||||||| |||||| | || | || || || |||| || |||||| || | |
Sbjct 18000 GCGTCCTTGTAGAGCATGAAGGGGTTGCCAGTTTCGACCTGGGCCTCGAGAATTGCGTAC 17941
Query 114650 CAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTA 114708
|| | | | ||| | || | || ||||| || ||||||| ||||| || | |
Sbjct 17940 CAAAGCTTTTGCG-CGGGGATCGTTTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAA 17882
Query 114709 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 114768
| ||| |||||||| || | | || ||| || || || | | ||||||||
Sbjct 17881 CAAGGCGCGGAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAA 17822
Query 114769 GAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGC 114828
||||| ||| | || | |||| ||||||| ||||||||| || || |||||||| ||
Sbjct 17821 GAGAGGCCACTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGCGC 17762
Query 114829 TGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 114888
|||||||||| ||| ||| |||| || | || ||||| || | |||| ||
Sbjct 17761 AAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGATTCTTGCGAAGGTCCAGGAA 17702
Query 114889 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACG 114945
|| | || || ||||||||||| || ||||| | ||||| | || |||
Sbjct 17701 CTCAAAGACGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTT 17642
Query 114946 ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACC 115005
||| | |||| || || | ||| ||| || | || || ||||| || | ||| ||
Sbjct 17641 GCCACCTTGGTCGACGTAGCGCGCCGTGTTGTTGTAGACACGGAGCATGGGGACGATGCC 17582
Query 115006 ATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCATGGATG 115063
| || | ||| || || || ||| || ||| | | || | || | ||||||
Sbjct 17581 GTTCGAGTAGCCGTTCGTGCCGGCGATGTAGGAGCC--GGTTGCGCGGATGTTGTGGATG 17524
Query 115064 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAG 115123
|| ||| ||||| || || ||| ||||| |||||||| | |||| || ||||
Sbjct 17523 CTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAA 17464
Query 115124 ATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTT 115183
|| || || ||||| ||| |||| | | || ||||| ||| ||| | || ||
Sbjct 17463 ATGCCTTCAATCGAATCATCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGA 17404
Query 115184 GGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTA 115243
|| || || ||||||||||| || || | |||||| | || | | ||||||
Sbjct 17403 GGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAGG 17344
Query 115244 TCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATA 115303
| ||| | || ||||||| |||||| | ||||| || |||| | ||| |||||
Sbjct 17343 TTGTAAGACTGCAAGACGCGCTCAATGTCGTGACCGTGGATGCCGACGGCGACACGCATG 17284
Query 115304 AACATGT 115310
| |||||
Sbjct 17283 AGCATGT 17277
>seq111
Length=630077
Score = 120 bits (132), Expect = 4e-22
Identities = 340/508 (67%), Gaps = 27/508 (5%)
Strand=Plus/Plus
Query 172526 CCCTTGGAAGCCTTGATGATTGGTGTCACCA--TTGAGACCACAAACCC--CAACTTGAG 172581
||||||| ||||||| ||| || || | | | ||| | | || ||| || ||||||
Sbjct 135957 CCCTTGGTCGCCTTGACGATGGGGGTGATAAACTCGAG-CAAGAAGCCCTTCAGCTTGAG 136015
Query 172582 GAGGGATGGCCAGAAGTAGTGGATCATATTCAGGATGAGACCCTTAATGTGTGAACCATC 172641
| || || | |||| | || | || | ||| |||||||| || || || |||||
Sbjct 136016 CAACGAAGGGAACCAGTAATCGAGGAAGTTGATGATCAGACCCTTGATATGCGATCCATC 136075
Query 172642 GTTATCCGCATCCGTCATAATCATAAGCCGACCATAGCGAAGCTCGGAAACATCTTGATA 172701
|| ||| ||| | ||| ||||| ||| || || || ||| | || || ||
Sbjct 136076 GTGATCTTGATCGGCCATGATCATGAGCTTGCCGTAACGGAGCGAGTCGACGTCGGTGTA 136135
Query 172702 CTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTTTGATGT 172761
| || ||||| || ||||||||||||| ||||| | ||||| ||| || | |||
Sbjct 136136 AACTTTGCCCTGCTGCAGACCCAAGATCTGCTTGATCGC-TTGAA-TCTCGGCAT--TGT 136191
Query 172762 -GAGTTGCGCCA---CTGAAGCATCGCGGACATTTTTACACTTCCCACGGAGAGGGAACA 172817
||| | || | | || || || || || |||| || || | |||||| |
Sbjct 136192 CGAGGAGGGCTTTGCCCGCCGCTTCACGCACGTTGAGCAACTTTCCTCGCAAAGGGAAGA 136251
Query 172818 CACCGTAGTGATCACGACCAACCACAGAAAGACCAGCAACTGCGAGGGTCTTCGCGGAAT 172877
|||| |||| || ||||| || |||| ||||| | || ||||| | ||| |||||||
Sbjct 136252 CACCATAGTTGTCTCGACCGACGACAGCCAGACCCGAGACGGCGAGCGCCTTGGCGGAAT 136311
Query 172878 CACCCTCCGTCACGATGAGCGTACACTTT--CCAGATTGTGCCGTCCCCGCCTTGTTCGC 172935
| || || |||| ||||||||| ||||| || | | | ||| || || ||||||||
Sbjct 136312 CTCCTTCGGTCAAGATGAGCGTGCACTTGGACCCGTTCCT--CGTACCAGCGTTGTTCGC 136369
Query 172936 ATCGTCCAACTTGGGAATACCAGTAATTTTGGA---CTTGCGGGCACCATCTGTCTTCTT 172992
||| || | |||| || ||| || || || |||| | || || ||||||||
Sbjct 136370 ATCTTCGAGCTTGACAAGACCCGTGATACGCGATCGCTTGTG---TCCGTCCGTCTTCTT 136426
Query 172993 GAG--TTCCTTCATCTCCTTGAACTTGG 173018
||| || || || |||||||||||
Sbjct 136427 GAGCATTTGGTC--CTGCTTGAACTTGG 136452
>seq66
Length=711016
Score = 104 bits (114), Expect = 3e-17
Identities = 270/409 (66%), Gaps = 2/409 (0%)
Strand=Plus/Minus
Query 8526 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCTCAAAATGAGGAG 8585
|| ||||| || | || ||| ||| || || || || |||||||| ||| |
Sbjct 647111 TACCAAGCCTCGACTTCCGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAATCCGAGACG 647052
Query 8586 ACACCCTTCTATCCACGATCCGTCTATGGCGTCTCAAAGGTTGCGGCACATTGGCTCGTG 8645
|| ||||| || || || || || || ||| | ||| | || ||| | ||
Sbjct 647051 ACGCCCTTTTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGCCTTCTGGATTGTC 646992
Query 8646 AAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCCGGTATTCTCTTCAACCACGAG 8705
||||| ||||| || | || || | | |||||| |||||| | ||||||||||||
Sbjct 646991 AAGAACTACCGCGAGGCGTACGGCATGTACGCGTGCAACGGTATCTTGTTCAACCACGAG 646932
Query 8706 TCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCACCGATGGTATCAAACAAATC 8765
|| || |||||||| | || || || | ||||||| || | | || | |||
Sbjct 646931 TCCCCGCGTCGTGGTCGCACCTTTGTCACGAGGAAGATCTCCCGAGCTGTCGCCGAGATC 646872
Query 8766 GTCGCG-GGTGAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAGGGACTGGGG 8824
|||| ||| | ||| | | | | | || || | | ||| || | || |||||
Sbjct 646871 -TCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAATATGGAGGCCAAGCGTGATTGGGG 646813
Query 8825 ACACGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTTCAACAAGAAGAGGCGGACGA 8884
||||||| ||||| || || | |||||| | | || ||||| || | |||||
Sbjct 646812 ACACGCCGCCGACTACGTCGAGGGTATGTGGAGGATGATGCAGCAAGACAAGCCCGACGA 646753
Query 8885 ATATGTCGTCGCGACGGGGGAGACACACTCCGTCAGGGAGTTCGTTGAG 8933
| |||| |||||||||| ||||| ||| | |||| |||||||||||||
Sbjct 646752 CTTTGTCCTCGCGACGGGTGAGACCCACCCTGTCAAGGAGTTCGTTGAG 646704
>seq135
Length=558922
Score = 84.2 bits (92), Expect = 3e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 8526 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCTCAAAATGAGGAG 8585
|| || || || |||||||| ||| || || || || ||||||| ||| |
Sbjct 259714 TACCAGGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTCCGAGACG 259655
Query 8586 ACACCCTTCTATCCACGATCCGTCTATGGCGTCTCAAAGGTTGCGGCACATTGGCTCGTG 8645
|| |||||||| || || || ||||| ||| | ||| | || ||| ||||
Sbjct 259654 ACCCCCTTCTACCCTCGTTCGCCTTATGGAGTCGCCAAGTTGTACGCCTTCTGGATCGTC 259595
Query 8646 AAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCCGGTATTCTCTTCAACCACGAG 8705
||||| ||||| || || || | | | |||||| |||||| |||||||||||||||
Sbjct 259594 AAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCCTCTTCAACCACGAG 259535
Query 8706 TCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATC 8744
|| ||||| ||||||| ||||| || | ||||||
Sbjct 259534 TCCCCCCGCCGTGGCCGCACCTTCGTCACGAGAAAGATC 259496
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597351934876840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |