Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900009495.1_202016-12-
23] 223 sequences; 35,405,415 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq82 114 1e-20
seq120 96.9 3e-15
seq115 95.1 1e-14
seq135 91.5 1e-13
>seq82
Length=702097
Score = 114 bits (126), Expect = 1e-20
Identities = 166/231 (72%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| ||||| | || | || || || | | | ||||||||||| ||||||||||||
Sbjct 522773 GCCACCTCGGAGGCGGAGGACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGC 522832
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
|| || || |||||||| || || |||| | |||| ||||| || ||||| || ||
Sbjct 522833 CAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGG 522892
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564
|| ||||| ||||| || | || || || | ||| || | ||||||| ||||||
Sbjct 522893 GATGCCTTCCTTGTC-TTGGATCTTGGTCTTGACGTTG-TCGATCGTGTCGGACGACTCG 522950
Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
||||||| || | ||| || || || ||||| || ||||| || ||| ||
Sbjct 522951 ACCTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACAAAGATTTGCCTG 523001
>seq120
Length=764448
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| ||||| | ||| | || || || | | |||||||| ||||||||||| |||
Sbjct 228290 CCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAATCGGCG 228349
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || |||||||| || || || | |||| ||||| |||||||| || ||
Sbjct 228350 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGA 228409
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565
|| || |||||||| ||| | || | || | ||| || | ||||| | ||||| |
Sbjct 228410 ATGCCCTCTTTGTC-CTGAATCTTGGCCTTGACGTTG-TCGATCGTGTCCGAGGACTCGA 228467
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||||| ||| | ||| || || ||||| || || || || ||||||||
Sbjct 228468 CCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 228516
Score = 93.3 bits (102), Expect = 4e-14
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|||||||| | ||| | || || || | | ||||||||||| || ||||| |||
Sbjct 228062 CCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTTTGGATATTGTAATCGGCG 228121
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || ||||| || || || || | |||| ||||| |||||||| || ||
Sbjct 228122 AGCGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGA 228181
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565
|| || |||||||| ||| | || | || | ||| || | ||||| | ||||| |
Sbjct 228182 ATGCCCTCTTTGTC-CTGAATCTTGGCCTTGACGTTG-TCGATCGTGTCCGAGGACTCGA 228239
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||||| ||| | ||| || || ||||| || || || || ||||||||
Sbjct 228240 CCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 228288
Score = 93.3 bits (102), Expect = 4e-14
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| ||||| | ||| | || || || | | |||||||| ||||||||||| |||
Sbjct 228518 CCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAATCGGCG 228577
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || |||||||| || || || | |||| ||||| |||||||| || ||
Sbjct 228578 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGA 228637
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565
|| || |||||||| ||| | || | || | ||| || | ||||| | ||||| |
Sbjct 228638 ATGCCCTCTTTGTC-CTGAATCTTGGCCTTGACGTTG-TCGATCGTGTCCGAGGACTCGA 228695
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||||| ||| | ||| || || ||||| || || || || || |||||
Sbjct 228696 CCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 228744
>seq115
Length=605796
Score = 95.1 bits (104), Expect = 1e-14
Identities = 140/195 (72%), Gaps = 4/195 (2%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
||||| ||||| |||||||||||| || || || |||||||| || || ||||
Sbjct 306269 GACTCTTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCG 306210
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539
|||| ||||| || ||||| || || || ||||| ||||| || | || || || |
Sbjct 306209 AAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTC-TTGGATCTTGGTCTTGAC 306151
Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
||| || | ||||||| |||||| ||||||| || | || || || || || || |
Sbjct 306150 GTTG-TCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCT 306092
Query 138599 TTACAAAAATCTGCA 138613
| ||||| || ||||
Sbjct 306091 TGACAAAGATTTGCA 306077
>seq135
Length=558922
Score = 91.5 bits (100), Expect = 1e-13
Identities = 101/132 (77%), Gaps = 2/132 (2%)
Strand=Plus/Plus
Query 52698 TACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGC-AGCCAAAGTACTTCAA 52756
||||||||||| || || || || ||||||| | || |||| | || ||| || ||
Sbjct 88876 TACATCGAGTTCGTCGCCGACCGATTGTTGGT-CGCCTTGGGCAACCCCAAGGTCTGGAA 88934
Query 52757 CGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTT 52816
||| || || ||||| |||||||||| || ||||| ||||||||||| ||||| ||
Sbjct 88935 CGCCGAGAACCCCTTTGACTTTATGAACATGATCTCGCTCGAGGGCAAGACAAACTTCTT 88994
Query 52817 CGAGAAGCGAGT 52828
||||||||| ||
Sbjct 88995 CGAGAAGCGTGT 89006
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496261016668560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |