Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900009495.1_202016-12- 23] 223 sequences; 35,405,415 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq107 203 4e-47 seq111 123 3e-23 seq66 96.9 4e-15 >seq107 Length=347312 Score = 203 bits (224), Expect = 4e-47 Identities = 561/851 (66%), Gaps = 17/851 (2%) Strand=Plus/Minus Query 116431 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 116490 ||||| || |||| || || || | | ||| ||| | | |||||| || || || Sbjct 18120 GCGATCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGTGCCGAGTACTCGATGATCTCG 18061 Query 116491 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 116550 || ||||| || || ||| || || || | ||||||||| ||||| || |||| Sbjct 18060 GTGCACAAGTTCGACGACTTGATCGTCCCAAGGTTCTTTTGGTTTGATTTCTTGTTCGCG 18001 Query 116551 GCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 116610 || |||||||||||||| | || | || || || |||| || |||||| || | | Sbjct 18000 GCGTCCTTGTAGAGCATGAAGGGGTTGCCAGTTTCGACCTGGGCCTCGAGAATTGCGTAC 17941 Query 116611 CATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTA 116669 || | | | ||| | || | || ||||| || ||||||| ||||| || | | Sbjct 17940 CAAAGCTTTTGCG-CGGGGATCGTTTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAA 17882 Query 116670 GAGGGCCTCAAACTCTTCACCCACAGCCTCTGAG-AGCCCTGGTGCCTTATCTGGACAGA 116728 | ||| |||||||| || | || || | | || || || || | | || |||| Sbjct 17881 CAAGGCGCGGAACTCTTCGCC-ATAGACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGA 17823 Query 116729 AGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCG 116788 |||||| ||| | || | |||| || |||| ||||||||| || || |||||||||| Sbjct 17822 AGAGAGGCCACTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGCG 17763 Query 116789 CCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAA 116848 | |||||||||| ||| ||| |||| || | || ||||| || | |||| | Sbjct 17762 CAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGATTCTTGCGAAGGTCCAGGA 17703 Query 116849 AGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGACG-- 116906 | || | || || ||||||||||| || ||||| | ||||| | || | |||| Sbjct 17702 ACTCAAAGACGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCC---GGGACGCT 17646 Query 116907 ----ACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGA 116962 ||| | |||| || || | |||||| ||| | || || ||||| || | || Sbjct 17645 TGTTGCCACCTTGGTCGACGTAGCGCGCCGTGTTGTTGTAGACACGGAGCATGGGGACGA 17586 Query 116963 TACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTGTTGGCTCTGACATCGTG 117020 | || | || | ||| || || || ||| || ||| | | | || | || | ||| Sbjct 17585 TGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTAGGAGCC--GGTTGCGCGGATGTTGTG 17528 Query 117021 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCC 117080 |||| || ||| ||||| || || ||| ||||| | |||||| | |||| || | Sbjct 17527 GATGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTC 17468 Query 117081 GTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGG 117140 ||| || || || ||||| ||| |||| | | || ||||| ||| ||| | || || Sbjct 17467 GTAAATGCCTTCAATCGAATCATCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGG 17408 Query 117141 CCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACAT 117200 || || || ||||||||||| || || | |||||| | || | | |||||| Sbjct 17407 GTGAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACAT 17348 Query 117201 CTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCG 117260 | ||| | || |||||| |||||| | ||||| || |||| | ||| || Sbjct 17347 GAGGTTGTAAGACTGCAAGACGCGCTCAATGTCGTGACCGTGGATGCCGACGGCGACACG 17288 Query 117261 CATAAACATGT 117271 ||| | ||||| Sbjct 17287 CATGAGCATGT 17277 >seq111 Length=630077 Score = 123 bits (136), Expect = 3e-23 Identities = 302/447 (68%), Gaps = 17/447 (4%) Strand=Plus/Plus Query 176546 CCCTTGGAAGCCTTGATGATTGGTGTCACCA--TTGAGACCACAAACCC--CAACTTGAG 176601 ||||||| ||||||| ||| || || | | | ||| | | || ||| || |||||| Sbjct 135957 CCCTTGGTCGCCTTGACGATGGGGGTGATAAACTCGAG-CAAGAAGCCCTTCAGCTTGAG 136015 Query 176602 GAGGGATGGCCAGAAGTAGTGGATCATATTGAGGATGAGACCCTTAATGTGTGAACCATC 176661 | || || | |||| | || | |||| ||| |||||||| || || || ||||| Sbjct 136016 CAACGAAGGGAACCAGTAATCGAGGAAGTTGATGATCAGACCCTTGATATGCGATCCATC 136075 Query 176662 GTTATCCGCATCCGTCATAATCATGAGCCGACCATAGCGAAGCTCGGAAACATCTTGATA 176721 || ||| ||| | ||| ||||||||| || || || ||| | || || || Sbjct 136076 GTGATCTTGATCGGCCATGATCATGAGCTTGCCGTAACGGAGCGAGTCGACGTCGGTGTA 136135 Query 176722 ATCCTTACCTTGTTGAAGACCCAAAATCTTCTTGAGATCATTGAACTCTTGGTTTGATGT 176781 | | || || || || |||||||| |||| ||||| | ||||| ||| || | ||| Sbjct 136136 AACTTTGCCCTGCTGCAGACCCAAGATCTGCTTGATCGC-TTGAA-TCTCGGCAT--TGT 136191 Query 176782 -GAGTTGCGCCA---CTGAAGCGTCGCGGACATTTTTACACTTCCCGCGGAGAGGGAACA 176837 ||| | || | | || || || || || |||| || || | |||||| | Sbjct 136192 CGAGGAGGGCTTTGCCCGCCGCTTCACGCACGTTGAGCAACTTTCCTCGCAAAGGGAAGA 136251 Query 176838 CACCGTAGTGATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAAT 176897 |||| |||| || ||||| || |||| ||||| | || ||||| | ||| ||||||| Sbjct 136252 CACCATAGTTGTCTCGACCGACGACAGCCAGACCCGAGACGGCGAGCGCCTTGGCGGAAT 136311 Query 176898 CACCCTCCGTCACGATGAGCGTACACTTT--CCAGATTGTGCCGTCCCCGCCTTGTTCGC 176955 | || || |||| ||||||||| ||||| || | | | ||| || || |||||||| Sbjct 136312 CTCCTTCGGTCAAGATGAGCGTGCACTTGGACCCGTTCCT--CGTACCAGCGTTGTTCGC 136369 Query 176956 ATCGTCCAACTTGGGAATACCAGTAAT 176982 ||| || | |||| || ||| || || Sbjct 136370 ATCTTCGAGCTTGACAAGACCCGTGAT 136396 >seq66 Length=711016 Score = 96.9 bits (106), Expect = 4e-15 Identities = 266/408 (65%), Gaps = 0/408 (0%) Strand=Plus/Minus Query 10441 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCACAAAATGAGGAG 10500 || ||||| || | || ||| ||| || || || || |||| ||| ||| | Sbjct 647111 TACCAAGCCTCGACTTCCGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAATCCGAGACG 647052 Query 10501 ACGCCCTTCTATCCACGATCCGTCTATGGCGTCTCAAAGGTTGCGGCACATTGGCTCGTG 10560 |||||||| || || || || || || ||| | ||| | || ||| | || Sbjct 647051 ACGCCCTTTTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGCCTTCTGGATTGTC 646992 Query 10561 AAGAATTATCGCGAATCCTATGGTCTCTTTGTGTGCTCCGGTATTCTCTTCAACCACGAG 10620 ||||| || ||||| | || || | | | |||| |||||| | |||||||||||| Sbjct 646991 AAGAACTACCGCGAGGCGTACGGCATGTACGCGTGCAACGGTATCTTGTTCAACCACGAG 646932 Query 10621 TCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCACCGATGGTATCAAACAAATC 10680 || || |||||||| | || || || | ||||||| || | | || | ||| Sbjct 646931 TCCCCGCGTCGTGGTCGCACCTTTGTCACGAGGAAGATCTCCCGAGCTGTCGCCGAGATC 646872 Query 10681 GTGGCGGGTGAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAGGGACTGGGGA 10740 | ||| | ||| | | | | | || || | | ||| || | || |||||| Sbjct 646871 TCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAATATGGAGGCCAAGCGTGATTGGGGA 646812 Query 10741 CACGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTCCAACAAGAAGAGGCGGACGAA 10800 |||||| ||||| || || | |||||| | | || ||||| || | ||||| Sbjct 646811 CACGCCGCCGACTACGTCGAGGGTATGTGGAGGATGATGCAGCAAGACAAGCCCGACGAC 646752 Query 10801 TATGTCGTCGCGACGGGGGAGACACACTCCGTCAGGGAGTTCGTTGAG 10848 | |||| |||||||||| ||||| ||| | |||| ||||||||||||| Sbjct 646751 TTTGTCCTCGCGACGGGTGAGACCCACCCTGTCAAGGAGTTCGTTGAG 646704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613505489848680