Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900009495.1_202016-12- 23] 223 sequences; 35,405,415 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq104 378 9e-100 seq64 176 6e-39 seq122 156 5e-33 seq77 105 8e-18 seq111 87.8 2e-12 >seq104 Length=485435 Score = 378 bits (418), Expect = 9e-100 Identities = 662/961 (69%), Gaps = 7/961 (1%) Strand=Plus/Plus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| || | ||||||||| ||||| | || ||||| || || |||||||||||||| Sbjct 392865 TCACCAGTGAGGATGGCGGCCTGGACAGCGGCACCGTAGGCAACGGCCTCATCGGGGTTG 392924 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | || || | || || ||||| || || ||||| | | || || | || ||| Sbjct 392925 ATGGACTTGTTAGGCTCCTTGCCGTTGAAGTAGTCCGAGACGAGTTTCTGGACCTTGGGG 392984 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || || ||||| || | ||||| || | || | || |||||||| || Sbjct 392985 ATACGAGTGGAGCCACCAACGAGGACGATCTCGTGGACGGAAGCCTTGTCGATCTTGGAA 393044 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || ||||| || ||||| || ||||| |||||||||||| |||| ||| Sbjct 393045 TCGCGAAGAACCTTCTCGACGGGGTCCATGGTGCCACGGAACAAGTCTTGGCACAACTCC 393104 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || || || ||||| || ||||| || ||||| || | || ||| | | ||| || || Sbjct 393105 TCGAAGCGGGCACGAGTGATGGAGGTGTAGAAGTCGATACCCTCGAAGAGCGAGTCGATC 393164 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 || ||||| || || || | ||||| | |||||||| || ||||| || || || || Sbjct 393165 TCGATGGTAGTCTGGGCGGCGGAAGAGAGGGTTCGCTTGGCACGCTCGCAGGCAGTGCGG 393224 Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429 | |||||| || ||||| | ||| || | ||| ||||| | || || || ||||| Sbjct 393225 AGACGACGGAGAGCACGGGCGTTGGACGAGAGATCCTTCTTGTTCTTGCGCTTGAACTCG 393284 Query 7430 TCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCC 7489 | |||||| | ||||| ||||| || ||||| |||||||| || || || Sbjct 393285 GCGACGAAGTGAGTGACGAGTCGGTTGTCGAAGTCCTCACCTCCCAAGTGGGTGTCACCG 393344 Query 7490 GCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTA 7549 ||||| || ||||| || |||||||| | |||||| | || | || ||||| ||||| Sbjct 393345 GCGGTGGCCTTGACCTCGAAGATACCCTCCTCAATGGTCAAAAGGGAGACATCGAACGTT 393404 Query 7550 CCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCG 7609 || || || || || || ||||| |||||| | ||| || | | || || ||||| ||| Sbjct 393405 CCTCCTCCGAGATCGAAGATGAGGACGTTCTTCTCGCCGACGGTCTTTTTGTCGAGGCCG 393464 Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATA 7669 || ||||| || || || || || || ||||||||||| || ||| ||||| | || Sbjct 393465 TAAGCGATGGCGGCGGCGGTGGGCTCGTTAATAATACGGAGGACGTTGAGGCCCGAGATG 393524 Query 7670 GTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACG 7729 | ||||| || || |||||||| ||||| ||||| |||||||| ||||| || ||| Sbjct 393525 ACACCGGCATCCTTGGTGGCTTGTCGCTGCGAGTCGTTGAAGTAGGCGGGGACAGTGACG 393584 Query 7730 ACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGA 7789 || |||| || || || | ||||| || | || ||| | || ||||| ||| || Sbjct 393585 ACGGCGTTGGTAACGGTCGTGCCGAGGTAGGCCTCAGCGGTCTCCTTCATCTTGAGCAGG 393644 Query 7790 ACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCA 7849 | ||| ||||| || || || | | ||||| || || || || |||| || | Sbjct 393645 ATCATGGATGAGATTTCCTCGGGGGTGAACTGCTTGGTCTCGCCTCGGTAATCGACCTGG 393704 Query 7850 ATCATGGGTTTATCCGCAGCACC--GGGGATAACCTTATACGACCAATCTTTCATATCGT 7907 || | ||| || | | | || | ||| ||||| | | ||| | ||||| ||| Sbjct 393705 ATGACGGGCTT----GGA-CTCCTTGTCGATGACCTTGAAGGGCCAGTGCTTCATGTCGG 393759 Query 7908 CTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGT 7967 ||||||| ||| || |||||| || || || ||||| ||||| || || |||| Sbjct 393760 ACTGGACCTCGCTGTCGGACCACTTTCGGCCAATGAGTCGCTTGGCATCGAAGACGGTGT 393819 Query 7968 T 7968 | Sbjct 393820 T 393820 >seq64 Length=2761491 Score = 176 bits (194), Expect = 6e-39 Identities = 527/807 (65%), Gaps = 15/807 (2%) Strand=Plus/Minus Query 7012 ACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAAT 7071 ||| || |||| |||||| || || | || ||||| || || |||||||||||||| || Sbjct 1049160 ACCGGTCAAGACGGCGGCCTGAACGGCGGCACCGTAGGCAACGGCCTCATCGGGGTTGAT 1049101 Query 7072 CGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGAT 7131 || || |||| || | || || | || || | | || || || ||||| Sbjct 1049100 CGACTTGTTCAATTGTCGGCCACCGAAGAACTCGGAAACGAGCGACTGGATCTTGGGGAT 1049041 Query 7132 TCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTC 7191 || ||||| |||||||| | ||||| || | || || | |||| ||| | ||| Sbjct 1049040 ACGGGTCGAGCCACCGACGAGGACGATGTCGTCGACCTTGGTGCGGTCGACCTTGGCGTC 1048981 Query 7192 TCGAAGTGTTTTTTCGACAGGTTCCATACATTTA-CGGAACAAGTCCATACACAGTTCCT 7250 || || ||||| || || | | | | ||||| | | | |||| Sbjct 1048980 CTTGAGGACCTTCTCGACGGGGTCGAG-CGTGGAGCGGAAGGTGGCGGCGTTGATCTCCT 1048922 Query 7251 CAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTT 7310 | || || ||||||| || || | | |||| || || | | | | ||| || | | Sbjct 1048921 CGAACCGGGCACGGGAGATCGAGGCAGAGAAGTCGGTACCTTGGAAGAGCGAGTCGACCT 1048862 Query 7311 CAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTA 7370 | | ||| || || | || || | || ||||| || ||||| ||||| | ||| | Sbjct 1048861 CGACGGTCGTCTGCGTAACGGACGAAAGGGTGCGCTTGGCACGCTCGCACGCGGATCGGA 1048802 Query 7371 AACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTT 7430 |||||| ||||||||||||| |||| || || ||| | || | | |||||| | Sbjct 1048801 GACGACGGAGGGCACGCGGGTCCTCGGAGATGTCGAGCTTGTTCTTCCTCTCAAACTCCT 1048742 Query 7431 CAGAGAAGTG-TCGAAGGAGTC-TCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCC 7488 |||||| || ||| | | | | || || || |||||||||||||| || || || Sbjct 1048741 TCTTGAAGTGCTCCAAGAGGGCGTTG--TCAAAGTCCTCACCACCCAAGTGGGTGTCACC 1048684 Query 7489 CGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGT 7548 ||||| || ||||| | |||| ||| || ||| | || | ||| ||||| || || Sbjct 1048683 AGCGGTGGCCTTGACGGCGAAGACACCACCCGAGATGGTCAAGAGCGAGACATCGAAAGT 1048624 Query 7549 ACCACCACCCAGGTCAAAAATGAGTACGTTCGTATC-------GTCGTCT--TTGTTCTT 7599 || || || || || || ||||| ||| | | || | | ||| || || Sbjct 1048623 TCCTCCTCCAAGATCGAAGATGAGAACGAGCTTCTCCTTCTTGGACTTCTCGGTGGCCTC 1048564 Query 7600 ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAG 7659 | | |||||||| ||||| || || || || || || || || ||||| || || || Sbjct 1048563 ACCCAGACCGTAGGCGATGGCAGCGGCGGTGGGCTCGTTGATGATACGGAGCACGTCCAA 1048504 Query 7660 GCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGG 7719 || || || ||| | || || || |||| | || ||||| ||||| ||||| || || Sbjct 1048503 ACCGGCGATCGTTCCGGCGTCCTTGGTCGAGAGACGCTGCGAGTCGTTGAAGTAAGCGGG 1048444 Query 7720 GACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCAT 7779 ||| || ||||| || | | |||| | ||| ||||| | | || ||| | || || | Sbjct 1048443 GACGGTGACGACGGCCTTCTTGACCTCCTTGCCGAGTTTGGTCTCGGCGGTCTCCTTGAG 1048384 Query 7780 TTTGGTAAGAACCATCGATGAAATCTC 7806 |||| ||| ||||| || || ||||| Sbjct 1048383 CTTGGAAAGGACCATGGACGAGATCTC 1048357 Score = 107 bits (118), Expect = 2e-18 Identities = 116/153 (76%), Gaps = 3/153 (2%) Strand=Plus/Minus Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGT 8052 ||| |||| ||| ||||| ||||| || | | | || || ||||| || || ||||| Sbjct 1048102 CTTGGCCGAGTCACCGATGAGACGCTCGGTCT---CGGTGAAGGCGACATAAGAAGGGGT 1048046 Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGAC 8112 || || || || |||||||| || || || || || ||||||||||||||||| ||||| Sbjct 1048045 GGTGCGGTTACCCTGGTCGTTGGCGATGATCTCGACTCGGTCGTTTTGCCAGACACCGAC 1047986 Query 8113 GCACGAATACGTTGTTCCTAAATCAATACCGAT 8145 ||| || || || ||||| | ||| ||||| || Sbjct 1047985 GCAGGAGTAGGTGGTTCCGAGATCGATACCTAT 1047953 >seq122 Length=195690 Score = 156 bits (172), Expect = 5e-33 Identities = 231/327 (71%), Gaps = 3/327 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||||||| || || || ||||| || ||| ||||||| ||| Sbjct 126650 TCGAAGTCCTCACCACCCAAGTGGGTGTCACCGGCGGTGGCCAAGACCTCAAAGACACCG 126709 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 |||| || | | ||| ||||| ||||| || || || || || | | || | | Sbjct 126710 TCTTCGATCGAGAGGAGCGAGACATCGAACGTTCCTCCTCCGAGATCGTAGACGATGATG 126769 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | | | |||| ||||||||||| ||||| || || || || || || Sbjct 126770 TTGCGCTCGCCACC---GGTCTTGTCGAGACCGTAGGCGATCGCGGCGGCAGTGGGCTCG 126826 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || | || || ||| |||||| || || || || | || || || |||||||||||| Sbjct 126827 TTGACAACTCGGAGAACGTTCAGACCGGCGATCGTGCCAGCGTCCTTGGTCGCTTGTCGT 126886 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || | ||||| |||||||| ||||| || ||||| |||| ||||| ||||| || | Sbjct 126887 TGAGCGTCGTTGAAGTAGGCTGGGACGGTGACGACGGCGTGGGTGACCTTCTTGCCCAAG 126946 Query 7757 TACGATTCCGCGATATCTTTCATTTTG 7783 || | || ||| | || ||||| ||| Sbjct 126947 TAGGCCTCGGCGGTCTCCTTCATCTTG 126973 >seq77 Length=382084 Score = 105 bits (116), Expect = 8e-18 Identities = 133/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 7601 TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGG 7660 |||||||||||||||| || || || || || || || || | ||| || || ||| Sbjct 141897 TCGAGACCGTACGCGAGGGCAGCGGCGGTGGGCTCGTTGATGACACGGAGCACGTCAAGG 141956 Query 7661 CCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGG 7720 || || || || | || || || ||||| ||||| ||||| ||||| |||||||| ||| Sbjct 141957 CCCGCGATCGTACCGGCGTCCTTAGTCGCCTGTCGCTGCGAGTCGTTGAAGTAGGCGGGG 142016 Query 7721 ACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATT 7780 || || ||||| |||| | |||| || ||||| || ||| ||| | || ||||| Sbjct 142017 ACAGTGACGACGGCGTGCTTGACCGGTTTTCCGAGGTAGCCTTCGGCGGTCTCCTTCATC 142076 Query 7781 TTG 7783 ||| Sbjct 142077 TTG 142079 >seq111 Length=630077 Score = 87.8 bits (96), Expect = 2e-12 Identities = 230/349 (66%), Gaps = 4/349 (1%) Strand=Plus/Plus Query 184049 ATAAGTCCCTTGATATGACTTCCATCGTTATCTGCATCGGTCATGATCATGAGTCTTCCG 184108 || || ||||||||||| |||||||| |||| ||||| |||||||||||| | ||| Sbjct 136050 ATCAGACCCTTGATATGCGATCCATCGTGATCTTGATCGGCCATGATCATGAGCTTGCCG 136109 Query 184109 TATCTGAGTTCGGAGAGTGATGTATACACTTTCCCTTGCTGAAGCCCCAAAATCTTTTTA 184168 || | ||| | || || || ||||| || ||||| || ||||| |||| || Sbjct 136110 TAACGGAGCGAGTCGACGTCGGTGTAAACTTTGCCCTGCTGCAGACCCAAGATCTGCTTG 136169 Query 184169 AGATCATTAAACTCCTTGTTTTCGGTAAGTTGTTTTACACTCGCGTCACGCACGTTCTTA 184228 | | | || ||| || ||| || ||| | ||| ||||||||||| Sbjct 136170 ATCGCTTGAATCTCGGCATTGTCGAGGAGGGCTTTGCCCGCCGCTTCACGCACGTTGAGC 136229 Query 184229 CATTTACCCCTAAGCGGAAAAACACCGTAATGATCACGACCAACAACTGAAAGACCAGCA 184288 | || || | | || || ||||| || | || ||||| || || | ||||| | Sbjct 136230 AACTTTCCTCGCAAAGGGAAGACACCATAGTTGTCTCGACCGACGACAGCCAGACCCGAG 136289 Query 184289 ATTGCAAGTGTTTTTGCAGAATCACCTTCGGTAATAATAAGAGTACACTT--ACCAGAGT 184346 | || || | || || ||||| |||||||| | || || || ||||| ||| || Sbjct 136290 ACGGCGAGCGCCTTGGCGGAATCTCCTTCGGTCAAGATGAGCGTGCACTTGGACC--CGT 136347 Query 184347 GTGTGGTACCGGCTTTATTGGCATCGTCGAGTTTTGGAATACCCGTTAT 184395 | ||||| || || || ||||| ||||| || || |||||| || Sbjct 136348 TCCTCGTACCAGCGTTGTTCGCATCTTCGAGCTTGACAAGACCCGTGAT 136396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635131029567320