Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900009495.1_202016-12-
23] 223 sequences; 35,405,415 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq104 378 9e-100
seq64 176 6e-39
seq122 156 5e-33
seq77 105 8e-18
seq111 87.8 2e-12
>seq104
Length=485435
Score = 378 bits (418), Expect = 9e-100
Identities = 662/961 (69%), Gaps = 7/961 (1%)
Strand=Plus/Plus
Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069
||||| || | ||||||||| ||||| | || ||||| || || ||||||||||||||
Sbjct 392865 TCACCAGTGAGGATGGCGGCCTGGACAGCGGCACCGTAGGCAACGGCCTCATCGGGGTTG 392924
Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129
|| | || || | || || ||||| || || ||||| | | || || | || |||
Sbjct 392925 ATGGACTTGTTAGGCTCCTTGCCGTTGAAGTAGTCCGAGACGAGTTTCTGGACCTTGGGG 392984
Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189
|| || || || ||||| || | ||||| || | || | || |||||||| ||
Sbjct 392985 ATACGAGTGGAGCCACCAACGAGGACGATCTCGTGGACGGAAGCCTTGTCGATCTTGGAA 393044
Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249
|| ||||| || ||||| || ||||| |||||||||||| |||| |||
Sbjct 393045 TCGCGAAGAACCTTCTCGACGGGGTCCATGGTGCCACGGAACAAGTCTTGGCACAACTCC 393104
Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309
|| || || ||||| || ||||| || ||||| || | || ||| | | ||| || ||
Sbjct 393105 TCGAAGCGGGCACGAGTGATGGAGGTGTAGAAGTCGATACCCTCGAAGAGCGAGTCGATC 393164
Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369
|| ||||| || || || | ||||| | |||||||| || ||||| || || || ||
Sbjct 393165 TCGATGGTAGTCTGGGCGGCGGAAGAGAGGGTTCGCTTGGCACGCTCGCAGGCAGTGCGG 393224
Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429
| |||||| || ||||| | ||| || | ||| ||||| | || || || |||||
Sbjct 393225 AGACGACGGAGAGCACGGGCGTTGGACGAGAGATCCTTCTTGTTCTTGCGCTTGAACTCG 393284
Query 7430 TCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCC 7489
| |||||| | ||||| ||||| || ||||| |||||||| || || ||
Sbjct 393285 GCGACGAAGTGAGTGACGAGTCGGTTGTCGAAGTCCTCACCTCCCAAGTGGGTGTCACCG 393344
Query 7490 GCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTA 7549
||||| || ||||| || |||||||| | |||||| | || | || ||||| |||||
Sbjct 393345 GCGGTGGCCTTGACCTCGAAGATACCCTCCTCAATGGTCAAAAGGGAGACATCGAACGTT 393404
Query 7550 CCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCG 7609
|| || || || || || ||||| |||||| | ||| || | | || || ||||| |||
Sbjct 393405 CCTCCTCCGAGATCGAAGATGAGGACGTTCTTCTCGCCGACGGTCTTTTTGTCGAGGCCG 393464
Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATA 7669
|| ||||| || || || || || || ||||||||||| || ||| ||||| | ||
Sbjct 393465 TAAGCGATGGCGGCGGCGGTGGGCTCGTTAATAATACGGAGGACGTTGAGGCCCGAGATG 393524
Query 7670 GTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACG 7729
| ||||| || || |||||||| ||||| ||||| |||||||| ||||| || |||
Sbjct 393525 ACACCGGCATCCTTGGTGGCTTGTCGCTGCGAGTCGTTGAAGTAGGCGGGGACAGTGACG 393584
Query 7730 ACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGA 7789
|| |||| || || || | ||||| || | || ||| | || ||||| ||| ||
Sbjct 393585 ACGGCGTTGGTAACGGTCGTGCCGAGGTAGGCCTCAGCGGTCTCCTTCATCTTGAGCAGG 393644
Query 7790 ACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCA 7849
| ||| ||||| || || || | | ||||| || || || || |||| || |
Sbjct 393645 ATCATGGATGAGATTTCCTCGGGGGTGAACTGCTTGGTCTCGCCTCGGTAATCGACCTGG 393704
Query 7850 ATCATGGGTTTATCCGCAGCACC--GGGGATAACCTTATACGACCAATCTTTCATATCGT 7907
|| | ||| || | | | || | ||| ||||| | | ||| | ||||| |||
Sbjct 393705 ATGACGGGCTT----GGA-CTCCTTGTCGATGACCTTGAAGGGCCAGTGCTTCATGTCGG 393759
Query 7908 CTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGT 7967
||||||| ||| || |||||| || || || ||||| ||||| || || ||||
Sbjct 393760 ACTGGACCTCGCTGTCGGACCACTTTCGGCCAATGAGTCGCTTGGCATCGAAGACGGTGT 393819
Query 7968 T 7968
|
Sbjct 393820 T 393820
>seq64
Length=2761491
Score = 176 bits (194), Expect = 6e-39
Identities = 527/807 (65%), Gaps = 15/807 (2%)
Strand=Plus/Minus
Query 7012 ACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAAT 7071
||| || |||| |||||| || || | || ||||| || || |||||||||||||| ||
Sbjct 1049160 ACCGGTCAAGACGGCGGCCTGAACGGCGGCACCGTAGGCAACGGCCTCATCGGGGTTGAT 1049101
Query 7072 CGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGAT 7131
|| || |||| || | || || | || || | | || || || |||||
Sbjct 1049100 CGACTTGTTCAATTGTCGGCCACCGAAGAACTCGGAAACGAGCGACTGGATCTTGGGGAT 1049041
Query 7132 TCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTC 7191
|| ||||| |||||||| | ||||| || | || || | |||| ||| | |||
Sbjct 1049040 ACGGGTCGAGCCACCGACGAGGACGATGTCGTCGACCTTGGTGCGGTCGACCTTGGCGTC 1048981
Query 7192 TCGAAGTGTTTTTTCGACAGGTTCCATACATTTA-CGGAACAAGTCCATACACAGTTCCT 7250
|| || ||||| || || | | | | ||||| | | | ||||
Sbjct 1048980 CTTGAGGACCTTCTCGACGGGGTCGAG-CGTGGAGCGGAAGGTGGCGGCGTTGATCTCCT 1048922
Query 7251 CAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTT 7310
| || || ||||||| || || | | |||| || || | | | | ||| || | |
Sbjct 1048921 CGAACCGGGCACGGGAGATCGAGGCAGAGAAGTCGGTACCTTGGAAGAGCGAGTCGACCT 1048862
Query 7311 CAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTA 7370
| | ||| || || | || || | || ||||| || ||||| ||||| | ||| |
Sbjct 1048861 CGACGGTCGTCTGCGTAACGGACGAAAGGGTGCGCTTGGCACGCTCGCACGCGGATCGGA 1048802
Query 7371 AACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTT 7430
|||||| ||||||||||||| |||| || || ||| | || | | |||||| |
Sbjct 1048801 GACGACGGAGGGCACGCGGGTCCTCGGAGATGTCGAGCTTGTTCTTCCTCTCAAACTCCT 1048742
Query 7431 CAGAGAAGTG-TCGAAGGAGTC-TCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCC 7488
|||||| || ||| | | | | || || || |||||||||||||| || || ||
Sbjct 1048741 TCTTGAAGTGCTCCAAGAGGGCGTTG--TCAAAGTCCTCACCACCCAAGTGGGTGTCACC 1048684
Query 7489 CGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGT 7548
||||| || ||||| | |||| ||| || ||| | || | ||| ||||| || ||
Sbjct 1048683 AGCGGTGGCCTTGACGGCGAAGACACCACCCGAGATGGTCAAGAGCGAGACATCGAAAGT 1048624
Query 7549 ACCACCACCCAGGTCAAAAATGAGTACGTTCGTATC-------GTCGTCT--TTGTTCTT 7599
|| || || || || || ||||| ||| | | || | | ||| || ||
Sbjct 1048623 TCCTCCTCCAAGATCGAAGATGAGAACGAGCTTCTCCTTCTTGGACTTCTCGGTGGCCTC 1048564
Query 7600 ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAG 7659
| | |||||||| ||||| || || || || || || || || ||||| || || ||
Sbjct 1048563 ACCCAGACCGTAGGCGATGGCAGCGGCGGTGGGCTCGTTGATGATACGGAGCACGTCCAA 1048504
Query 7660 GCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGG 7719
|| || || ||| | || || || |||| | || ||||| ||||| ||||| || ||
Sbjct 1048503 ACCGGCGATCGTTCCGGCGTCCTTGGTCGAGAGACGCTGCGAGTCGTTGAAGTAAGCGGG 1048444
Query 7720 GACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCAT 7779
||| || ||||| || | | |||| | ||| ||||| | | || ||| | || || |
Sbjct 1048443 GACGGTGACGACGGCCTTCTTGACCTCCTTGCCGAGTTTGGTCTCGGCGGTCTCCTTGAG 1048384
Query 7780 TTTGGTAAGAACCATCGATGAAATCTC 7806
|||| ||| ||||| || || |||||
Sbjct 1048383 CTTGGAAAGGACCATGGACGAGATCTC 1048357
Score = 107 bits (118), Expect = 2e-18
Identities = 116/153 (76%), Gaps = 3/153 (2%)
Strand=Plus/Minus
Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGT 8052
||| |||| ||| ||||| ||||| || | | | || || ||||| || || |||||
Sbjct 1048102 CTTGGCCGAGTCACCGATGAGACGCTCGGTCT---CGGTGAAGGCGACATAAGAAGGGGT 1048046
Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGAC 8112
|| || || || |||||||| || || || || || ||||||||||||||||| |||||
Sbjct 1048045 GGTGCGGTTACCCTGGTCGTTGGCGATGATCTCGACTCGGTCGTTTTGCCAGACACCGAC 1047986
Query 8113 GCACGAATACGTTGTTCCTAAATCAATACCGAT 8145
||| || || || ||||| | ||| ||||| ||
Sbjct 1047985 GCAGGAGTAGGTGGTTCCGAGATCGATACCTAT 1047953
>seq122
Length=195690
Score = 156 bits (172), Expect = 5e-33
Identities = 231/327 (71%), Gaps = 3/327 (1%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| || |||||||||||||| || || || ||||| || ||| ||||||| |||
Sbjct 126650 TCGAAGTCCTCACCACCCAAGTGGGTGTCACCGGCGGTGGCCAAGACCTCAAAGACACCG 126709
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
|||| || | | ||| ||||| ||||| || || || || || | | || | |
Sbjct 126710 TCTTCGATCGAGAGGAGCGAGACATCGAACGTTCCTCCTCCGAGATCGTAGACGATGATG 126769
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| ||| | | | |||| ||||||||||| ||||| || || || || || ||
Sbjct 126770 TTGCGCTCGCCACC---GGTCTTGTCGAGACCGTAGGCGATCGCGGCGGCAGTGGGCTCG 126826
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| | || || ||| |||||| || || || || | || || || ||||||||||||
Sbjct 126827 TTGACAACTCGGAGAACGTTCAGACCGGCGATCGTGCCAGCGTCCTTGGTCGCTTGTCGT 126886
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| | ||||| |||||||| ||||| || ||||| |||| ||||| ||||| || |
Sbjct 126887 TGAGCGTCGTTGAAGTAGGCTGGGACGGTGACGACGGCGTGGGTGACCTTCTTGCCCAAG 126946
Query 7757 TACGATTCCGCGATATCTTTCATTTTG 7783
|| | || ||| | || ||||| |||
Sbjct 126947 TAGGCCTCGGCGGTCTCCTTCATCTTG 126973
>seq77
Length=382084
Score = 105 bits (116), Expect = 8e-18
Identities = 133/183 (73%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 7601 TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGG 7660
|||||||||||||||| || || || || || || || || | ||| || || |||
Sbjct 141897 TCGAGACCGTACGCGAGGGCAGCGGCGGTGGGCTCGTTGATGACACGGAGCACGTCAAGG 141956
Query 7661 CCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGG 7720
|| || || || | || || || ||||| ||||| ||||| ||||| |||||||| |||
Sbjct 141957 CCCGCGATCGTACCGGCGTCCTTAGTCGCCTGTCGCTGCGAGTCGTTGAAGTAGGCGGGG 142016
Query 7721 ACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATT 7780
|| || ||||| |||| | |||| || ||||| || ||| ||| | || |||||
Sbjct 142017 ACAGTGACGACGGCGTGCTTGACCGGTTTTCCGAGGTAGCCTTCGGCGGTCTCCTTCATC 142076
Query 7781 TTG 7783
|||
Sbjct 142077 TTG 142079
>seq111
Length=630077
Score = 87.8 bits (96), Expect = 2e-12
Identities = 230/349 (66%), Gaps = 4/349 (1%)
Strand=Plus/Plus
Query 184049 ATAAGTCCCTTGATATGACTTCCATCGTTATCTGCATCGGTCATGATCATGAGTCTTCCG 184108
|| || ||||||||||| |||||||| |||| ||||| |||||||||||| | |||
Sbjct 136050 ATCAGACCCTTGATATGCGATCCATCGTGATCTTGATCGGCCATGATCATGAGCTTGCCG 136109
Query 184109 TATCTGAGTTCGGAGAGTGATGTATACACTTTCCCTTGCTGAAGCCCCAAAATCTTTTTA 184168
|| | ||| | || || || ||||| || ||||| || ||||| |||| ||
Sbjct 136110 TAACGGAGCGAGTCGACGTCGGTGTAAACTTTGCCCTGCTGCAGACCCAAGATCTGCTTG 136169
Query 184169 AGATCATTAAACTCCTTGTTTTCGGTAAGTTGTTTTACACTCGCGTCACGCACGTTCTTA 184228
| | | || ||| || ||| || ||| | ||| |||||||||||
Sbjct 136170 ATCGCTTGAATCTCGGCATTGTCGAGGAGGGCTTTGCCCGCCGCTTCACGCACGTTGAGC 136229
Query 184229 CATTTACCCCTAAGCGGAAAAACACCGTAATGATCACGACCAACAACTGAAAGACCAGCA 184288
| || || | | || || ||||| || | || ||||| || || | ||||| |
Sbjct 136230 AACTTTCCTCGCAAAGGGAAGACACCATAGTTGTCTCGACCGACGACAGCCAGACCCGAG 136289
Query 184289 ATTGCAAGTGTTTTTGCAGAATCACCTTCGGTAATAATAAGAGTACACTT--ACCAGAGT 184346
| || || | || || ||||| |||||||| | || || || ||||| ||| ||
Sbjct 136290 ACGGCGAGCGCCTTGGCGGAATCTCCTTCGGTCAAGATGAGCGTGCACTTGGACC--CGT 136347
Query 184347 GTGTGGTACCGGCTTTATTGGCATCGTCGAGTTTTGGAATACCCGTTAT 184395
| ||||| || || || ||||| ||||| || || |||||| ||
Sbjct 136348 TCCTCGTACCAGCGTTGTTCGCATCTTCGAGCTTGACAAGACCCGTGAT 136396
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635131029567320
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