Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900009495.1_202016-12- 23] 223 sequences; 35,405,415 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq107 168 8e-37 seq111 136 5e-27 seq66 129 7e-25 seq135 89.7 6e-13 >seq107 Length=347312 Score = 168 bits (186), Expect = 8e-37 Identities = 529/808 (65%), Gaps = 21/808 (3%) Strand=Plus/Plus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 ||| ||| ||||| ||||||| ||||| |||| ||||| || | || ||||| || Sbjct 17269 CCCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGACATTGAGCGCGT 17328 Query 111671 TTTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCT 111729 ||| || | ||| || |||||| | | || || | |||||| | || || |||| Sbjct 17329 CTTGCAGTCTTACAACCTCATGTCCGAGCGCTACTTT-ACCCACGCCTCGCCGACGCTCT 17387 Query 111730 TCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGG 111789 ||||||| || || || || || | || |||||||| | | | ||||| | Sbjct 17388 TCAACGCCGGAACGCCTCACCCGCAGCTTTCGTCCTGTTTCCTGGTCACGATGAAGGATG 17447 Query 111790 ATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTG 111849 |||| || | |||||||||| ||| |||| || || | ||||| ||| || | Sbjct 17448 ATTCGATTGAAGGCATTTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAGACCGCCG 17507 Query 111850 GTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA-GGTAC 111907 |||||||||| || |||||| | || | || | | | ||| || | | || || Sbjct 17508 GTGGTATCGGTTTGAGCATCCACAACATCCGCGCAACC--GGCTCCTACATCGCCGGCAC 17565 Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967 || || | || | || || | || ||||| || || | ||| ||| |||||||| Sbjct 17566 GAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACACGGCGCGCTA 17625 Query 111968 TGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATG 112021 || |||||| ||| ||||| | ||| | |||| |||| || ||||| || Sbjct 17626 CGTCGACCAAGGTGGCAACAAGCGTCCC---GGAGCCTTCGCGATCTACCTCGAGCCGTG 17682 Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CG 112079 |||||| || || | |||||||| || | || || || || | ||||| | || Sbjct 17683 GCACGCTGACGTCTTTGAGTTCCTGGACCTTCGCAAGAATCACGGCAAGGAGGAAGTCCG 17742 Query 112080 CGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 112139 || | || |||||||||| || ||||||||||| |||||||||||| || | || ||| Sbjct 17743 CGCT--CGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTCTTCATGGAGCGTGTCGAG 17800 Query 112140 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTG 112199 | ||| | ||| ||||||| || || | | | || ||||| ||| ||| | | Sbjct 17801 GCCGCCGGCGAGTGGCCTCTCTTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTCTAT 17860 Query 112200 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACG 112259 || || ||||| ||| | | | || ||||| | || | || || | ||| Sbjct 17861 GGCGAAGAGTTCCGCGCCTTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAAACG 17920 Query 112260 GTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 112318 | || || || | | | ||| | || |||||| || | || ||| ||||| | || Sbjct 17921 ATCCCCGC-GCAAAAGCTTTGGTACGCAATTCTCGAGGCCCAGGTCGAAACTGGCAACCC 17979 Query 112319 ATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 112378 | ||||| ||||| |||||| ||| | || || |||||||| | || ||| Sbjct 17980 CTTCATGCTCTACAAGGACGCCGCGAACAAGAAATCAAACCAAAAGAACCTTGGGACGAT 18039 Query 112379 CAAGAGTTCCAACCTCTGTACAGAAATC 112406 |||| || ||| | || || || ||| Sbjct 18040 CAAGTCGTCGAACTTGTGCACCGAGATC 18067 >seq111 Length=630077 Score = 136 bits (150), Expect = 5e-27 Identities = 250/358 (70%), Gaps = 10/358 (3%) Strand=Plus/Plus Query 176723 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 176782 |||| || ||||||||||| || || || |||| ||| ||| | |||||||||||| Sbjct 136044 TTGATGATCAGACCCTTGATATGCGATCCATCGTGATCTTGATCGGCCATGATCATGAGC 136103 Query 176783 CGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATC 176842 || || || ||| | || || || | || ||||| || |||||||||||| Sbjct 136104 TTGCCGTAACGGAGCGAGTCGACGTCGGTGTAAACTTTGCCCTGCTGCAGACCCAAGATC 136163 Query 176843 TTCTTGAGATCG-TTGAACTCTTGGT-TTGATGTG-AGCTGTGTGACAGAGGCATCACGA 176899 | ||||| ||| ||||| ||| || ||| | | || | || | | || ||||| Sbjct 136164 TGCTTGA--TCGCTTGAA-TCTCGGCATTGTCGAGGAGGGCTTTGCCCGCCGCTTCACGC 136220 Query 176900 ACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAG 176959 || || |||| || || | |||||||||||| |||| || ||||| || |||| Sbjct 136221 ACGTTGAGCAACTTTCCTCGCAAAGGGAAGACACCATAGTTGTCTCGACCGACGACAGCC 136280 Query 176960 AGACCCGCAACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACTTG 177019 ||||||| || ||||||| || || ||||| || || |||| |||||| || |||||| Sbjct 136281 AGACCCGAGACGGCGAGCGCCTTGGCGGAATCTCCTTCGGTCAAGATGAGCGTGCACTTG 136340 Query 177020 --CCAGATTGTGCCGTACCCGCCTTGTTCGCATCATCCAATTTGGGAATACCAGTAAT 177075 || | | | |||||| || ||||||||||| || | ||| || ||| || || Sbjct 136341 GACCCGTTCCT--CGTACCAGCGTTGTTCGCATCTTCGAGCTTGACAAGACCCGTGAT 136396 >seq66 Length=711016 Score = 129 bits (142), Expect = 7e-25 Identities = 282/417 (68%), Gaps = 4/417 (1%) Strand=Plus/Minus Query 13592 CCGCATCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 13651 |||| | || |||||||| | || ||| ||| || ||||| ||| | || ||| Sbjct 647118 CCGCTTTTACCAAGCCTCGACTTCCGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAATC 647059 Query 13652 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 13711 |||| ||| ||||| ||||| || ||| ||||||||| | ||| | || || Sbjct 647058 CGAGACGACGCCCTTTTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGCCTTCTG 646999 Query 13712 GCTCGTAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCAA 13771 | | || ||||| ||||||||| | ||||| ||| || ||| ||| ||| | ||||| Sbjct 646998 GATTGTCAAGAACTACCGCGAGGCGTACGGCATGTACGCGTGCAACGGTATCTTGTTCAA 646939 Query 13772 CCATGAATCACCGAGACGAGGT-GCAGACTTTGTGACCATGAAGAT-TACCGAGGGTATC 13829 ||| || || ||| | || ||| ||| |||||| || | |||||| | ||||| | || Sbjct 646938 CCACGAGTCCCCGCGTCGTGGTCGCAC-CTTTGTCACGAGGAAGATCTCCCGAGC-TGTC 646881 Query 13830 AAACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGA 13889 | ||| | ||| || |||| | | | | | || || || | || || | Sbjct 646880 GCCGAGATCTCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAATATGGAGGCCAAGCGT 646821 Query 13890 GATTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAA 13949 |||||||| ||||| ||||| || || | ||||||| ||| | || ||||| | Sbjct 646820 GATTGGGGACACGCCGCCGACTACGTCGAGGGTATGTGGAGGATGATGCAGCAAGACAAG 646761 Query 13950 GCCGACGAATATGTAGTAGCAACGGGTGAGACCCATTCAGTGAGGCGGTTCATTGAG 14006 ||||||| | ||| | || |||||||||||||| | || | | |||| ||||| Sbjct 646760 CCCGACGACTTTGTCCTCGCGACGGGTGAGACCCACCCTGTCAAGGAGTTCGTTGAG 646704 >seq135 Length=558922 Score = 89.7 bits (98), Expect = 6e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 13592 CCGCATCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 13651 |||| |||| || ||||| | || ||| ||| || ||||| ||| | || || Sbjct 259721 CCGCTTCTACCAGGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTC 259662 Query 13652 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 13711 |||| ||| ||||||||||| || ||| || |||||| | ||| | || || Sbjct 259661 CGAGACGACCCCCTTCTACCCTCGTTCGCCTTATGGAGTCGCCAAGTTGTACGCCTTCTG 259602 Query 13712 GCTCGTAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCAA 13771 | |||| ||||| ||||||||||| |||| ||| || ||| ||| ||||||||||| Sbjct 259601 GATCGTCAAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCCTCTTCAA 259542 Query 13772 CCATGAATCACC 13783 ||| || || || Sbjct 259541 CCACGAGTCCCC 259530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620740669680560