Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900009495.1_202016-12-
23] 223 sequences; 35,405,415 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq107 134 2e-26
>seq107
Length=347312
Score = 134 bits (148), Expect = 2e-26
Identities = 449/691 (65%), Gaps = 7/691 (1%)
Strand=Plus/Minus
Query 110341 ATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAG 110400
|| || || |||||||| || ||| || || | |||||| || || ||||| |
Sbjct 18066 ATCTCGGTGCACAAGTTCGACGACTTGATCGTCCCAAGGTTCTTTTGGTTTGATTTCTTG 18007
Query 110401 TTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATG 110460
|| || ||||| ||||||||| | ||| | |||||||| ||| | || ||||||
Sbjct 18006 TTCGCGGCGTCCTTGTAGAGCATGAAGGGGTTGCCAGTTTCGACCTGGGCCTCGAGAATT 17947
Query 110461 GCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTT 110519
|| | ||| | | | ||| |||||| ||| || ||| | || |||| ||||| ||
Sbjct 17946 GCGTACCAAAGCTTTTGCG-CGGGGATCGTTTTCTTGGCGCGGCCCTCCTTTTCGTATTT 17888
Query 110520 GGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGG 110579
| ||||| | || || | || || || || || || || | | ||||
Sbjct 17887 CTCGAACAAGGCGCGGAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGGCTTCGGCGGG 17828
Query 110580 ACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCA 110639
|||||||| | ||| | || | |||| || | || |||||| || || ||||||||
Sbjct 17827 GCAGAAGAGAGGCCACTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCA 17768
Query 110640 CATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTC 110699
| ||| |||| || ||||| || | || || | || || || ||| || ||
Sbjct 17767 GAGCGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGATTCTTGCGAAGGTC 17708
Query 110700 CAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACG 110759
|| || || | || || | |||||| || ||||| |||| |||| || ||| |||
Sbjct 17707 CAGGAACTCAAAGACGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACG 17648
Query 110760 ACGAC--CCGCCT-GGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAAT 110816
|| ||| ||| || ||||| || ||| ||| |||| | |||||| || |
Sbjct 17647 CTTGTTGCCACCTTGGTCGACGTAGCGCGCCGTGTTGTTGTAGACACGGAGCATGGGGAC 17588
Query 110817 AATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTG 110876
|| || | || | || || || || || ||| | || || |||| |||
Sbjct 17587 GATGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTAGGAGCCGGTTGCGCGGATGTTGTG 17528
Query 110877 GATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC-TCTGTGAGTGTAC 110935
||| || ||| |||||||| || ||| || | || ||| ||| |||| ||
Sbjct 17527 GATGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCT-TGAGCGTGT 17469
Query 110936 CATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAG 110995
| ||||| || ||||||||||| |||| | | | || || || || || | ||| |
Sbjct 17468 CGTAAATGCCTTCAATCGAATCATCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCG 17409
Query 110996 GACGAGGCGTTCCCGCATTGAAGAGTGTAGG 111026
| |||||||||| || |||||||| || ||
Sbjct 17408 GGTGAGGCGTTCCGGCGTTGAAGAGCGTCGG 17378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588974358229400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |