Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900009495.1_202016-12-
23] 223 sequences; 35,405,415 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq107 136 7e-27
seq111 105 1e-17
>seq107
Length=347312
Score = 136 bits (150), Expect = 7e-27
Identities = 775/1228 (63%), Gaps = 40/1228 (3%)
Strand=Plus/Minus
Query 213192 GCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTG 213251
|||| ||||| |||| || | || |||| ||||||||| || || |||| | |||||
Sbjct 18408 GCCATGTCGCACGACGACTCGATCGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTG 18349
Query 213252 AGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGC 213311
||||| ||||| || || ||| |||||| || | |||| | || || ||
Sbjct 18348 AGCTTGCGCGCCTCGGGCGAATCGAACGGCATCGCCAAGGCCATGAACGCGTCGGCGAGA 18289
Query 213312 CCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAA 213370
|| || || |||||||||||||| | ||| | | || || || | || ||| |
Sbjct 18288 CCTTGCACTCCGATGCCGATGGGGCGGTGGCGGAAATTGGAGTTCTGCGC-CTCGATGAC 18230
Query 213371 GGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATG 213430
|| || | ||| ||||||||| ||| | |||| | | | || ||| ||| |
Sbjct 18229 AGGATAGTAATTGACGTCGATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTC 18170
Query 213431 GGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAA-CTCAGGCAGGGCGA 213489
| || ||| | | || |||| | |||| || | || ||| |||| ||||
Sbjct 18169 GTGCA---ACTTTTTA---AAGTCGTACACGCCGTTCTTGATGAAGCTC-GGCAACGCGA 18117
Query 213490 TGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGC 213549
| ||||| |||||| ||||| ||| | | | | |||||| |||||||||||||
Sbjct 18116 TCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGTGCCGAGTACTCGATGATCTCGGTGC 18057
Query 213550 ACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAAT 213609
||| ||| | ||| || || ||||||| |||||||| || ||| || | |
Sbjct 18056 ACAAGTTCGACGACTTGATCGTCCCAAGGTTCTTTTGGTTTGATTTCTTGTTCGCGGCGT 17997
Query 213610 CCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGA 213669
|||||||||||||| ||||| || || || | ||||| | | || || | ||| |
Sbjct 17996 CCTTGTAGAGCATGAAGGGGTTGCCAGTTTCGACCTGGGCCTCGAGAATTGCGTACCAAA 17937
Query 213670 GGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCT---CGTACTGTTCGT 213726
| | || || | | || | ||| | | ||| |||| | |||
Sbjct 17936 GCTTTTGCGCGGGGATCGTTTTCTTGGCG----CGGCCCT--CCTTTTCGTATTTCTCGA 17883
Query 213727 AGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGAT---GCGGGAC 213783
| | || ||| || | ||| |||| || || || || || | ||||| |
Sbjct 17882 ACAAGGCGCGGAACTCTTCGCCATAGACTTCGTGGAGGCCGGG---GGCTTCGGCGGGGC 17826
Query 213784 ACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACA 213843
| | ||| ||| || ||| | | ||| | || |||||| || || || | ||| |
Sbjct 17825 AGAAGAGAGGCCACTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGA 17766
Query 213844 GCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTA 213903
|||| ||| || || | | | || ||| || || ||||| || || |
Sbjct 17765 GCGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGATTCTTGCGAAGGTCCA 17706
Query 213904 GAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCC 213960
| || ||||||| ||| |||||||||||||| | |||||| || ||||| || | ||
Sbjct 17705 GGAACTCAAAGACGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCT 17646
Query 213961 TCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCA 214020
| ||||| || ||||| || | ||| ||||| ||| || || | ||| || |
Sbjct 17645 TGTTGCCACCTTGGTCGACGTAGCGCGCCGTGTTGTTGTAGACACGGAGCATGGGGACGA 17586
Query 214021 GCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCA 214080
||||| || | ||||| || || || || || ||||||| || | | |||| |
Sbjct 17585 TGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTAGGAGCCGGTTGCGCGGATGTTGTGGA 17526
Query 214081 TGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCA 214140
|| | || || ||||||||| ||||||||| | ||||| | | | || ||
Sbjct 17525 TGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGT 17466
Query 214141 TGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCC 214200
||||| | || ||||| | | | | || ||| ||| ||| ||||| ||
Sbjct 17465 AAATGCCTTCAATCGAATCATCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGT 17406
Query 214201 TGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTG---TTAGAGA 214257
| || || | |||||| ||||| || ||| ||| |||| | | | || |
Sbjct 17405 GAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGG---GTAAAGTAGCGCTCGGACA 17349
Query 214258 GGAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACC 214317
||| |||| | || || ||| |||||||| |||||| | ||| |
Sbjct 17348 TGAGGTTGTAAGACTGCAAGACGCGCTCAATGTCGTGACCGTGGATGCCGACGGCGACAC 17289
Query 214318 TCATCAGCATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGGCCCTTG---AGCAGGTAGG 214374
||| ||||||||||| || | || || | ||| | | || |||| |||||
Sbjct 17288 GCATGAGCATGTGCTGCGGGCGTTC---GGCGACCTTGCCGTCGATGCGAAGCAAGTAGG 17232
Query 214375 AGCGCTCCAGAGTCTTGAACCCAAAGTA 214402
||||||| || || ||||| ||||||||
Sbjct 17231 AGCGCTCGAGCGTTTTGAAGCCAAAGTA 17204
>seq111
Length=630077
Score = 105 bits (116), Expect = 1e-17
Identities = 164/234 (70%), Gaps = 3/234 (1%)
Strand=Plus/Minus
Query 48454 GATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTC 48513
|||||| || || || ||| ||| ||||| | |||||| || | ||||| |||||
Sbjct 393223 GATCTGAAAGCCATAAAAGCACCTCGCCTCGGCGAACTGCACCTCACTTGAGAACCTCTC 393164
Query 48514 CAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAG 48573
| || |||||||| || | |||||||||||| || |||||||| || || || |
Sbjct 393163 AACCAAGTTCTCATTCACGACCCCATCTGAAGCGGCGAAGAAGGCGAGCACGTGGGCGAT 393104
Query 48574 GAAATGGCGCTCGTTGTGGGTGAG---AGCATTCCAGCCCTGTACGTCTTTGCCCAGGTC 48630
|| | ||| |||| || | |||| | |||| | || | ||| |||| |||||
Sbjct 393103 AAAGTAGCGTTCGTCGTTGTTGAGCTTGTGGTGCCAGTCGTGGAGGTCGCTGCCGAGGTC 393044
Query 48631 CACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATAT 48684
| ||||| | | ||| |||||||| | |||| |||||||||| |||| ||
Sbjct 393043 GATCTCTTCGGCGGACCAAAAGGACGCTTGGGCTTGTTTGTACATGGCCCAAAT 392990
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931530203352320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |