Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900009495.1_202016-12-
23] 223 sequences; 35,405,415 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq107 226 3e-53
seq135 102 1e-15
seq61 102 1e-15
seq120 96.9 4e-14
seq108 93.3 5e-13
>seq107
Length=347312
Score = 226 bits (250), Expect = 3e-53
Identities = 335/471 (71%), Gaps = 19/471 (4%)
Strand=Plus/Minus
Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125
|||||||||||||||||||||| ||| |||| ||||||||||| |||| |||||| ||
Sbjct 17634 TGGTCGACGTAGCGCGCCGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAG 17575
Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185
| |||||| ||||| || | ||||| ||||| ||||| | ||||| | || |||
Sbjct 17574 TAGCCGTTCGTGCCGGCGATGTAGGAGCCGGTTGCGCGGATGTTGTGGATGCTCAAACCG 17515
Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245
|| || ||||| | ||||||||||||||||||| |||||||||||||| ||||| ||
Sbjct 17514 ATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAAATGCCTTCA 17455
Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305
||||| || ||||||| || || || || ||||| |||||||| | ||| |||
Sbjct 17454 ATCGAATCATCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCCG 17395
Query 1630306 GCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGT-AGGT 1630364
|||||||||||||| |||| || ||| || | || |||||| || || ||
Sbjct 17394 GCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAGGTTGTAAGAC 17335
Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424
|| || |||||| || | |||| | || | | ||||| ||||||
Sbjct 17334 TGCAAG-ACGCGC------------TCAATGTCGTGA---CCGTGGATGCCGACGGCGAC 17291
Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCG-CGCACCTTGGTCAGGTAGG 1630483
||||||||||||| ||| || || ||| |||| |||| || | | || |||||
Sbjct 17290 ACGCATGAGCATGTGCTGCGGGCGTTCGGCGACCTTGCCGTCGATGCGAAG-CAAGTAGG 17232
Query 1630484 ACCGGCGCATGGTCATGAGGCCAAAGTAGGAAAAGGCAAAATCGCGGTCGT 1630534
| || | || ||| ||||||||| || | |||||||||||||
Sbjct 17231 AGCGCTCGAGCGTTTTGAAGCCAAAGTAATTGTAGCCGAAATCGCGGTCGT 17181
Score = 125 bits (138), Expect = 9e-23
Identities = 286/439 (65%), Gaps = 0/439 (0%)
Strand=Plus/Minus
Query 1628162 ACTGGACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTGG 1628221
||| || |||||||||||||| ||| | |||| | |||| || ||||||| ||||| |
Sbjct 18074 ACTCGATGATCTCGGTGCACAAGTTCGACGACTTGATCGTCCCAAGGTTCTTTTGGTTTG 18015
Query 1628222 TGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCG 1628281
|| ||| |||||||||||| ||||||| |||| ||| || |||| ||| |||
Sbjct 18014 ATTTCTTGTTCGCGGCGTCCTTGTAGAGCATGAAGGGGTTGCCAGTTTCGACCTGGGCCT 17955
Query 1628282 CGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCGCGCGCGGCCCTNNNNNN 1628341
||| || || |||| | || ||||||| | || ||||||||||
Sbjct 17954 CGAGAATTGCGTACCAAAGCTTTTGCGCGGGGATCGTTTTCTTGGCGCGGCCCTCCTTTT 17895
Query 1628342 NNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCGCCT 1628401
|| | |||| ||| ||||| |||||||| || |
Sbjct 17894 CGTATTTCTCGAACAAGGCGCGGAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGGCTT 17835
Query 1628402 CGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGGTCAC 1628461
||| || || ||||| | ||| ||||| ||| | | | || ||| ||||| ||
Sbjct 17834 CGGCGGGGCAGAAGAGAGGCCACTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGG 17775
Query 1628462 ACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTT 1628521
|||| || || | ||||| || || || ||| |||||||||||||| |||||
Sbjct 17774 GAATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGATTCTTGC 17715
Query 1628522 TGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGC 1628581
||||| || | || | | ||| |||||||||||||| |||||| || ||||| |
Sbjct 17714 GAAGGTCCAGGAACTCAAAGACGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTC 17655
Query 1628582 CCTTGCGCTTGCCGCCGCC 1628600
| |||||| ||| ||
Sbjct 17654 CGGGACGCTTGTTGCCACC 17636
Score = 120 bits (132), Expect = 4e-21
Identities = 175/242 (72%), Gaps = 4/242 (2%)
Strand=Plus/Minus
Query 1626982 TGGTCGACGGTAAACTGGATGGCGTCGGCGGCGGGCCTGGTGCGCAGATAGTACATGCCG 1627041
||||||||||| |||| ||| || || |||||| | ||||||| |||||||| ||
Sbjct 19235 TGGTCGACGGTGAACTTGATCGCACCGACGGCGGCGCGCGTGCGCAAGTAGTACATACCC 19176
Query 1627042 GTCTTGAGGCCGCGGCGCCACGCGTAGGCGTGCATCGACGTGATGCGCTCGGGCGTCGCG 1627101
||||| || || || ||| ||||| |||||||||||||| || | ||||| |
Sbjct 19175 GTCTTCAGTCCTCGCTTCCAGCCGTAGAAGTGCATCGACGTGAGCTGCGCCATCGTCGGG 19116
Query 1627102 -TCGGCGCAGTACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATCGGCCGC 1627160
||| | ||| | ||||||||| || |||||||| ||| | ||||||||||
Sbjct 19115 CTCGAC-AAGTGGATGTTGAGCGATTGCGACTGGTCGATGAAGGCACCTCGATCGGCCGA 19057
Query 1627161 CATGTCGATGGTGACCCGGTTG-GGCACCTCCCACACGGTCTTGAAGATGGCCTTGAGGT 1627219
|| ||||| | | | ||| | | |||||| ||||||||| ||||||||||||| |
Sbjct 19056 CAGATCGATAAT-AGTCTTTTGCGAGAGCTCCCAGACGGTCTTGTAGATGGCCTTGAGAT 18998
Query 1627220 CG 1627221
||
Sbjct 18997 CG 18996
>seq135
Length=558922
Score = 102 bits (112), Expect = 1e-15
Identities = 126/172 (73%), Gaps = 3/172 (2%)
Strand=Plus/Minus
Query 869704 GAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAAAAAGCCAGGAC 869763
||| || || ||| ||||||| |||||||||||| |||||||||||| || |||||
Sbjct 87996 GAATCGCTCGACCAAGTTCTCGTTGACGATGCCGTCGGAGGCGGCGAAAAAGGCGAGGAC 87937
Query 869764 GTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGC---GACACCCAGTGGACGGTGTCGGC 869820
|||| ||| |||| |||||||||| ||||| |||||| | ||||
Sbjct 87936 GTGCGAGATGAAGTAGCGCTCGTCGGGCTTGAGCTTGTTGTCCCAGTCGTGCATGTCCTT 87877
Query 869821 GCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTAC 869872
| | ||||| ||| ||||||||||| | || ||||||||||| ||||||
Sbjct 87876 GGACAAGTCCATCTCTTCGGCGGTCCAAAAGGATGCCTCGGCCTTCTTGTAC 87825
>seq61
Length=200753
Score = 102 bits (112), Expect = 1e-15
Identities = 145/203 (71%), Gaps = 6/203 (3%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||| ||| || ||| | | ||||| || || | ||||||||||||||||| ||
Sbjct 54418 GCTTGGACAGCTCTCCGGGGAGGATCAATCGGACCGAGGTCTGGATCTCGCGCGACGAGA 54359
Query 1254403 TCGTG---TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGA 1254459
| || ||| | |||| || ||| || || || ||| || ||||||| || |
Sbjct 54358 TGGTCGCCTTGTGGTTGT---AGGTCGCGAGCTTGCACGCTTCGATGGCGATGCGCTCAA 54302
Query 1254460 TCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGG 1254519
||||||||||| |||||||| | || | ||||| |||||| || || || |||||
Sbjct 54301 AGATGTCGTTGACGAACGAGTTGAGGATCAGCATCGCCTTGTTCGAAATACCGGTGTCGG 54242
Query 1254520 GGTGCACCTGCTTGAGCACCTTG 1254542
|||| || ||||| | |||||||
Sbjct 54241 GGTGGACTTGCTTCAACACCTTG 54219
>seq120
Length=764448
Score = 96.9 bits (106), Expect = 4e-14
Identities = 102/132 (77%), Gaps = 2/132 (2%)
Strand=Plus/Plus
Query 19053 ATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCC-GTG 19111
||||| || ||||| |||||||| ||||||| ||| || ||||| ||||| |||
Sbjct 472143 ATCGGTGGTACGGTCACGTGCGTCATCCGCAACGCTCCGTTCGGTCTCGGAGAGCCCGTG 472202
Query 19112 CTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGG 19171
|| |||||| | || || | ||||||||||||||||||||||| || ||||||||
Sbjct 472203 -TTCGACAAGCTGGAAGCTCTTTTGGCCCACGCCATGCTGTCGATCCCCGCAACCAAGGG 472261
Query 19172 ATTCGAGATTGG 19183
|| ||||||||
Sbjct 472262 CTTTGAGATTGG 472273
Score = 91.5 bits (100), Expect = 2e-12
Identities = 154/223 (69%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 1574008 TCGACGTCGTGCGCAAGATCATCAAGCACCACGCCTCCAAGAGGATCGACCTGCCGCCCG 1574067
|||||||||| ||||| ||||||| |||| || | | || || || || |
Sbjct 374981 TCGACGTCGTACGCAACCGCATCAAGGCTTTCGCCCAGAAAAAGGTCACACTCCCACCGG 374922
Query 1574068 GACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGG 1574127
| ||||||||| | ||||||||||||| ||||| | | || ||| |||||||| |
Sbjct 374921 GTCGCCACAAGCTCGTCATCCTCGACGAAGCCGATTCGATGACCCCGGGAGCCCAGCAAG 374862
Query 1574128 CCCTGCGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACA 1574187
| || || || ||||||| | ||||||| || ||||| ||| | |||||||||
Sbjct 374861 CGCTCCGCAGGACGATGGAAATCTTCTCCAACACCACTCGCTTCGCCTTTGCGTGCAACC 374802
Query 1574188 CGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGCGCCAT 1574230
| | | |||||||| | | || ||||| ||||||||
Sbjct 374801 AGAGCAACAAGATCATCGAGCCGATTCAGAGTCGATGCGCCAT 374759
>seq108
Length=1268086
Score = 93.3 bits (102), Expect = 5e-13
Identities = 143/203 (70%), Gaps = 6/203 (3%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||| || ||| || | | ||||| ||| || | |||||||||||||||| ||
Sbjct 165414 GCTTGGACAATTCTCCAGGGAGGATCAAGCGAACCGAAGTCTGGATCTCGCGCGACGTGA 165355
Query 1254403 TCGTG---TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGA 1254459
|||| ||| | |||| | ||||| || | |||||| | |||||| || |
Sbjct 165354 TCGTCGCCTTGTGGTTGT---ATTGCGCGAGCTTGGACGCCTCGAGGGTGATGCGCTCAA 165298
Query 1254460 TCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGG 1254519
||||||||||| |||||||| | || ||||| |||||| ||||| ||| ||| |
Sbjct 165297 AGATGTCGTTGACGAACGAGTTGAGGATGAGCATCGCCTTGTTCGAGATACCCGTGTCCG 165238
Query 1254520 GGTGCACCTGCTTGAGCACCTTG 1254542
|||| |||||| | | ||| |||
Sbjct 165237 GGTGAACCTGCCTCAACACTTTG 165215
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107120899575691
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |