Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900009495.1_202016-12- 23] 223 sequences; 35,405,415 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq43 109 5e-19 seq120 95.1 1e-14 >seq43 Length=1423701 Score = 109 bits (120), Expect = 5e-19 Identities = 277/408 (68%), Gaps = 15/408 (4%) Strand=Plus/Plus Query 34204 GGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAG-CGT-GCCGTGAT 34261 || ||||| || || |||||||| |||| || || | | | ||| | ||| |||| | | Sbjct 1325972 GGGGGGTTCTTAAGGATGAAGGTCGTGAGTTTGTG-GCGCA-TGTCGACGTTGCCGCGCT 1326029 Query 34262 AACCGCATGCTTTGCAGCCCTGACAGATAATG--TTCTTTTTAGCGGACACGATGAGCTC 34319 ||||| || |||||| | || || ||| ||| | || | || ||||||||| Sbjct 1326030 TGCCGCAGGCCTTGCAGTC---ACGGAGGATGAATTCGTCTTTGGTGAT--GATGAGCTC 1326084 Query 34320 AGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAG 34379 || || ||||| | || || |||| ||| |||||| |||||| | || |||| Sbjct 1326085 CGTTTCGGGGTTCTTGCACGACGCGCACAGCACGAACTTGTCGATGAAGACGTCGAGCAA 1326144 Query 34380 GTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATC 34439 ||| | | | | ||||| | ||| ||||| ||| | |||||| | | | | Sbjct 1326145 GTCACGCAGACGATTCGTCTCGTGCGCGCCATTGACAATGTAGCGTTCGGTCTCATCGTT 1326204 Query 34440 GACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACG 34499 || || || ||||| || |||||||| ||| |||| |||||||| | ||| || Sbjct 1326205 GAAGGTCGCCTGGGCGCCGAGTTCGCACCCAAAGAACTTGGTCGGGTACGACGACGGGCG 1326264 Query 34500 -TCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCT 34558 | |||| || |||| || | ||||||| | ||||| |||||||||||||| Sbjct 1326265 ATTCAAG-GCTCGCGCGACATCAGCCATGTTGGGAAACACAGTTTTGATGCCGTTGCCGC 1326323 Query 34559 TTCCTTCGACCTTGGCGCAGATGCG-CGGCATTTTGTAGCGGTAGAAC 34605 || |||| ||||| ||| ||| ||||| ||||||||||||||| Sbjct 1326324 GGCCCTCGATCTTGG-TCAGGAGCGAGGGCATCTTGTAGCGGTAGAAC 1326370 >seq120 Length=764448 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || ||||| || | |||||||| || || || |||| ||| | Sbjct 228744 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 228685 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | | || || |||||| |||||||| ||| | ||| || ||| Sbjct 228684 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAAGAGGGCATTCCCCCAGACCAA 228625 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | || || | || || || ||||| ||||||| | | || | || ||||||||| Sbjct 228624 CAACGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAAC 228565 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| || || || ||| ||||| ||||| | | || ||||| || Sbjct 228564 ATTCAGAAGGAGTCGACGCTGCACTTGGTGCTCCGTCTCCGAGGTGG 228518 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || ||||| || | |||||||| || || || |||| ||| | Sbjct 228516 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 228457 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | | || || |||||| |||||||| ||| | ||| || ||| Sbjct 228456 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAAGAGGGCATTCCCCCAGACCAA 228397 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | || || | || || || ||||| ||||||| | | || | || ||||||||| Sbjct 228396 CAACGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAAC 228337 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| || || || ||| ||||| ||||| | | || ||||| || Sbjct 228336 ATTCAGAAGGAGTCGACGCTGCACTTGGTGCTCCGTCTCCGAGGTGG 228290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412840477973939