Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900009495.1_202016-12-
23] 223 sequences; 35,405,415 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq43 109 5e-19
seq120 95.1 1e-14
>seq43
Length=1423701
Score = 109 bits (120), Expect = 5e-19
Identities = 277/408 (68%), Gaps = 15/408 (4%)
Strand=Plus/Plus
Query 34204 GGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAG-CGT-GCCGTGAT 34261
|| ||||| || || |||||||| |||| || || | | | ||| | ||| |||| | |
Sbjct 1325972 GGGGGGTTCTTAAGGATGAAGGTCGTGAGTTTGTG-GCGCA-TGTCGACGTTGCCGCGCT 1326029
Query 34262 AACCGCATGCTTTGCAGCCCTGACAGATAATG--TTCTTTTTAGCGGACACGATGAGCTC 34319
||||| || |||||| | || || ||| ||| | || | || |||||||||
Sbjct 1326030 TGCCGCAGGCCTTGCAGTC---ACGGAGGATGAATTCGTCTTTGGTGAT--GATGAGCTC 1326084
Query 34320 AGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAG 34379
|| || ||||| | || || |||| ||| |||||| |||||| | || ||||
Sbjct 1326085 CGTTTCGGGGTTCTTGCACGACGCGCACAGCACGAACTTGTCGATGAAGACGTCGAGCAA 1326144
Query 34380 GTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATC 34439
||| | | | | ||||| | ||| ||||| ||| | |||||| | | | |
Sbjct 1326145 GTCACGCAGACGATTCGTCTCGTGCGCGCCATTGACAATGTAGCGTTCGGTCTCATCGTT 1326204
Query 34440 GACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACG 34499
|| || || ||||| || |||||||| ||| |||| |||||||| | ||| ||
Sbjct 1326205 GAAGGTCGCCTGGGCGCCGAGTTCGCACCCAAAGAACTTGGTCGGGTACGACGACGGGCG 1326264
Query 34500 -TCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCT 34558
| |||| || |||| || | ||||||| | ||||| ||||||||||||||
Sbjct 1326265 ATTCAAG-GCTCGCGCGACATCAGCCATGTTGGGAAACACAGTTTTGATGCCGTTGCCGC 1326323
Query 34559 TTCCTTCGACCTTGGCGCAGATGCG-CGGCATTTTGTAGCGGTAGAAC 34605
|| |||| ||||| ||| ||| ||||| |||||||||||||||
Sbjct 1326324 GGCCCTCGATCTTGG-TCAGGAGCGAGGGCATCTTGTAGCGGTAGAAC 1326370
>seq120
Length=764448
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| || ||||| || | |||||||| || || || |||| ||| |
Sbjct 228744 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 228685
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || ||| | | || || |||||| |||||||| ||| | ||| || |||
Sbjct 228684 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAAGAGGGCATTCCCCCAGACCAA 228625
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
||| | || || | || || || ||||| ||||||| | | || | || |||||||||
Sbjct 228624 CAACGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAAC 228565
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
||||| || || || ||| ||||| ||||| | | || ||||| ||
Sbjct 228564 ATTCAGAAGGAGTCGACGCTGCACTTGGTGCTCCGTCTCCGAGGTGG 228518
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || || ||||| || | |||||||| || || || |||| ||| |
Sbjct 228516 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 228457
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || ||| | | || || |||||| |||||||| ||| | ||| || |||
Sbjct 228456 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAAGAGGGCATTCCCCCAGACCAA 228397
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
||| | || || | || || || ||||| ||||||| | | || | || |||||||||
Sbjct 228396 CAACGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAAC 228337
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
||||| || || || ||| ||||| ||||| | | || ||||| ||
Sbjct 228336 ATTCAGAAGGAGTCGACGCTGCACTTGGTGCTCCGTCTCCGAGGTGG 228290
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412840477973939
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |